/usr/include/trilinos/Stokhos_SmolyakPseudoSpectralOperator.hpp is in libtrilinos-stokhos-dev 12.4.2-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 | // @HEADER
// ***********************************************************************
//
// Stokhos Package
// Copyright (2009) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Eric T. Phipps (etphipp@sandia.gov).
//
// ***********************************************************************
// @HEADER
#ifndef STOKHOS_SMOLYAK_PSEUDO_SPECTRAL_OPERATOR_HPP
#define STOKHOS_SMOLYAK_PSEUDO_SPECTRAL_OPERATOR_HPP
#include "Stokhos_PseudoSpectralOperator.hpp"
#include "Stokhos_SmolyakBasis.hpp"
#include "Stokhos_TensorProductPseudoSpectralOperator.hpp"
#include "Teuchos_SerialDenseMatrix.hpp"
#include "Teuchos_BLAS.hpp"
namespace Stokhos {
/*!
* \brief An operator for building pseudo-spectral coefficients using
* a sparse Smolyak construction.
*/
template <typename ordinal_t,
typename value_t,
typename point_compare_type =
typename DefaultPointCompare<ordinal_t,value_t>::type>
class SmolyakPseudoSpectralOperator :
public PseudoSpectralOperator<ordinal_t,value_t,point_compare_type> {
public:
typedef ordinal_t ordinal_type;
typedef value_t value_type;
typedef PseudoSpectralOperator<ordinal_type,value_type,point_compare_type> base_type;
typedef typename base_type::point_type point_type;
typedef typename base_type::point_set_type point_set_type;
typedef typename base_type::point_map_type point_map_type;
typedef typename base_type::iterator iterator;
typedef typename base_type::const_iterator const_iterator;
typedef typename base_type::set_iterator set_iterator;
typedef typename base_type::const_set_iterator const_set_iterator;
typedef MultiIndex<ordinal_type> multiindex_type;
typedef TensorProductPseudoSpectralOperator<ordinal_type, value_type> operator_type;
typedef Teuchos::Array< Teuchos::RCP<operator_type> > operator_set_type;
//! Constructor
template <typename coeff_compare_type>
SmolyakPseudoSpectralOperator(
const SmolyakBasis<ordinal_type,value_type,coeff_compare_type>& smolyak_basis,
bool use_smolyak_apply = true,
bool use_pst = true,
const point_compare_type& point_compare = point_compare_type());
//! Destructor
virtual ~SmolyakPseudoSpectralOperator() {}
//! Number of points
ordinal_type point_size() const { return points.size(); }
//! Number of coefficients
ordinal_type coeff_size() const { return coeff_sz; }
//! Iterator to begining of point set
iterator begin() { return point_map.begin(); }
//! Iterator to end of point set
iterator end() { return point_map.end(); }
//! Iterator to begining of point set
const_iterator begin() const { return point_map.begin(); }
//! Iterator to end of point set
const_iterator end() const { return point_map.end(); }
//! Iterator to begining of point set
set_iterator set_begin() { return points.begin(); }
//! Iterator to end of point set
set_iterator set_end() { return points.end(); }
//! Iterator to begining of point set
const_set_iterator set_begin() const { return points.begin(); }
//! Iterator to end of point set
const_set_iterator set_end() const { return points.end(); }
//! Get point index for given point
ordinal_type index(const point_type& point) const {
const_set_iterator it = points.find(point);
TEUCHOS_TEST_FOR_EXCEPTION(
it == points.end(), std::logic_error, "Invalid term " << point);
return it->second.second;
}
//! Get point for given index
const point_type& point(ordinal_type n) const { return point_map[n]; }
//! Transform values at quadrature points to PCE coefficients
/*!
* \c input is a vector storing values of a function at the quadrature
* points, and \c result will contain the resulting polynomial chaos
* coefficients. \c input and \c result can have multiple columns for
* vector-valued functions and set \c trans to true if these (multi-)
* vectors are layed out in a transposed fashion.
*/
void transformQP2PCE(
const value_type& alpha,
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& input,
Teuchos::SerialDenseMatrix<ordinal_type,value_type>& result,
const value_type& beta,
bool trans = false) const;
//! Transform PCE coefficients to quadrature values
/*!
* \c input is a vector storing polynomial chaos coefficients
* and \c result will contain the resulting values at the quadrature points.
* \c input and \c result can have multiple columns for
* vector-valued functions and set \c trans to true if these (multi-)
* vectors are layed out in a transposed fashion.
*/
virtual void transformPCE2QP(
const value_type& alpha,
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& input,
Teuchos::SerialDenseMatrix<ordinal_type,value_type>& result,
const value_type& beta,
bool trans = false) const;
protected:
//! Apply transformation operator using direct method
void apply_direct(
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& A,
const value_type& alpha,
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& input,
Teuchos::SerialDenseMatrix<ordinal_type,value_type>& result,
const value_type& beta,
bool trans) const;
/*!
* \brief Transform values at quadrature points to PCE coefficients
* using Smolyak formula
*/
void transformQP2PCE_smolyak(
const value_type& alpha,
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& input,
Teuchos::SerialDenseMatrix<ordinal_type,value_type>& result,
const value_type& beta,
bool trans) const;
/*!
* \brief Transform PCE coefficients to values at quadrature points
* using Smolyak formula
*/
void transformPCE2QP_smolyak(
const value_type& alpha,
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& input,
Teuchos::SerialDenseMatrix<ordinal_type,value_type>& result,
const value_type& beta,
bool trans) const;
void gather(
const Teuchos::Array<ordinal_type>& map,
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& input,
bool trans,
Teuchos::SerialDenseMatrix<ordinal_type,value_type>& result) const;
void scatter(
const Teuchos::Array<ordinal_type>& map,
const Teuchos::SerialDenseMatrix<ordinal_type,value_type>& input,
bool trans,
Teuchos::SerialDenseMatrix<ordinal_type,value_type>& result) const;
protected:
//! Use Smolyak apply method
bool use_smolyak;
//! Number of coefficients
ordinal_type coeff_sz;
//! Smolyak sparse grid
point_set_type points;
//! Map index to sparse grid term
point_map_type point_map;
//! Smolyak coefficients
Teuchos::Array<value_type> smolyak_coeffs;
//! Tensor pseudospectral operators
operator_set_type operators;
//! Gather maps for each operator for Smolyak apply
Teuchos::Array< Teuchos::Array<ordinal_type> > gather_maps;
//! Scatter maps for each operator for Smolyak apply
Teuchos::Array< Teuchos::Array<ordinal_type> > scatter_maps;
//! Matrix mapping points to coefficients
Teuchos::SerialDenseMatrix<ordinal_type,value_type> qp2pce;
//! Matrix mapping coefficients to points
Teuchos::SerialDenseMatrix<ordinal_type,value_type> pce2qp;
//! BLAS wrappers
Teuchos::BLAS<ordinal_type,value_type> blas;
};
}
#include "Stokhos_SmolyakPseudoSpectralOperatorImp.hpp"
#endif
|