/usr/include/trilinos/Tpetra_Distributor.hpp is in libtrilinos-tpetra-dev 12.4.2-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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// ***********************************************************************
//
// Tpetra: Templated Linear Algebra Services Package
// Copyright (2008) Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ************************************************************************
// @HEADER
#ifndef TPETRA_DISTRIBUTOR_HPP
#define TPETRA_DISTRIBUTOR_HPP
#include "Tpetra_Util.hpp"
#include <Teuchos_as.hpp>
#include <Teuchos_Describable.hpp>
#include <Teuchos_ParameterListAcceptorDefaultBase.hpp>
#include <Teuchos_VerboseObject.hpp>
// If TPETRA_DISTRIBUTOR_TIMERS is defined, Distributor will time
// doPosts (both versions) and doWaits, and register those timers with
// Teuchos::TimeMonitor so that summarize() or report() will show
// results.
// #ifndef TPETRA_DISTRIBUTOR_TIMERS
// # define TPETRA_DISTRIBUTOR_TIMERS 1
// #endif // TPETRA_DISTRIBUTOR_TIMERS
#ifdef TPETRA_DISTRIBUTOR_TIMERS
# undef TPETRA_DISTRIBUTOR_TIMERS
#endif // TPETRA_DISTRIBUTOR_TIMERS
#include "KokkosCompat_View.hpp"
#include "Kokkos_Core.hpp"
#include "Kokkos_TeuchosCommAdapters.hpp"
namespace Tpetra {
namespace Details {
/// \brief The type of MPI send that Distributor should use.
///
/// This is an implementation detail of Distributor. Please do
/// not rely on these values in your code.
enum EDistributorSendType {
DISTRIBUTOR_ISEND, // Use MPI_Isend (Teuchos::isend)
DISTRIBUTOR_RSEND, // Use MPI_Rsend (Teuchos::readySend)
DISTRIBUTOR_SEND, // Use MPI_Send (Teuchos::send)
DISTRIBUTOR_SSEND // Use MPI_Ssend (Teuchos::ssend)
};
/// \brief Convert an EDistributorSendType enum value to a string.
///
/// This is an implementation detail of Distributor. Please do
/// not rely on this function in your code.
std::string
DistributorSendTypeEnumToString (EDistributorSendType sendType);
/// \brief Enum indicating how and whether a Distributor was initialized.
///
/// This is an implementation detail of Distributor. Please do
/// not rely on these values in your code.
enum EDistributorHowInitialized {
DISTRIBUTOR_NOT_INITIALIZED, // Not initialized yet
DISTRIBUTOR_INITIALIZED_BY_CREATE_FROM_SENDS, // By createFromSends
DISTRIBUTOR_INITIALIZED_BY_CREATE_FROM_RECVS, // By createFromRecvs
DISTRIBUTOR_INITIALIZED_BY_REVERSE, // By createReverseDistributor
DISTRIBUTOR_INITIALIZED_BY_COPY // By copy constructor
};
/// \brief Convert an EDistributorHowInitialized enum value to a string.
///
/// This is an implementation detail of Distributor. Please do
/// not rely on this function in your code.
std::string
DistributorHowInitializedEnumToString (EDistributorHowInitialized how);
} // namespace Details
/// \brief Valid values for Distributor's "Send type" parameter.
///
/// This is mainly useful as an implementation detail of
/// Distributor. You may use it if you would like a programmatic
/// way to get all possible values of the "Send type" parameter of
/// Distributor.
Array<std::string> distributorSendTypes ();
/// \class Distributor
/// \brief Sets up and executes a communication plan for a Tpetra DistObject.
///
/// \note Most Tpetra users do not need to know about this class.
///
/// This class encapsulates the general information and
/// communication services needed for subclasses of \c DistObject
/// (such as CrsMatrix and MultiVector) to do data redistribution
/// (Import and Export) operations. It is an implementation detail
/// of Import and Export; in particular; it actually does the
/// communication.
///
/// Here is the typical way to use this class:
/// 1. Create a Distributor. (The constructor is inexpensive.)
/// 2. Set up the Distributor once, using one of the two "plan
/// creation" methods: either createFromSends(), or
/// createFromRecvs(). This may be more expensive and
/// communication-intensive than Step 3.
/// 3. Communicate the data by calling doPostsAndWaits() (forward
/// mode), or doReversePostsAndWaits() (reverse mode). You may
/// do this multiple times with the same Distributor instance.
///
/// Step 2 is expensive, but you can amortize its cost over multiple
/// uses of the Distributor for communication (Step 3). You may
/// also separate out "posts" (invoking nonblocking communication)
/// and "waits" (waiting for that communication to complete), by
/// calling doPosts() (resp. doReversePosts()), then doWaits()
/// (resp. doReverseWaits()). This is useful if you have local work
/// to do between the posts and waits, because it may overlap
/// communication with computation. Whether it actually <i>does</i>
/// overlap, depends on both the MPI implementation and your choice
/// of parameters for the Distributor.
///
/// Instances of Distributor take the following parameters that
/// control communication and debug output:
/// - "Barrier between receives and sends" (<tt>bool</tt>):
/// Whether to execute a barrier between receives and sends in
/// do[Reverse]Posts(). A barrier is required for correctness
/// when the "Send type" parameter is "Rsend". Otherwise, a
/// barrier is correct and may be useful for debugging, but not
/// recommended, since it introduces useless synchronization.
/// - "Send type" (<tt>std::string</tt>): When using MPI, the
/// variant of MPI_Send to use in do[Reverse]Posts(). Valid
/// values include "Isend", "Rsend", "Send", and "Ssend". The
/// default is "Send". (The receive type is always MPI_Irecv, a
/// nonblocking receive. Since we post receives first before
/// sends, this prevents deadlock, even if MPI_Send blocks and
/// does not buffer.)
/// - "Debug" (\c bool): If true, print copious debugging output on
/// all processes in the Distributor's communicator. This is
/// useful only for debugging Distributor and other Tpetra classes
/// that use it (like Import and Export). If the Distributor was
/// created using one of the constructors that takes a
/// Teuchos::FancyOStream, it will write debugging output to that
/// stream. Otherwise, it will write debugging output to stderr.
/// Currently, the "Debug" parameter overrides "VerboseObject"
/// (see below).
/// - "VerboseObject" (sublist): Optional sublist for controlling
/// behavior of Distributor as a Teuchos::VerboseObject. This is
/// currently useful only for debugging. This sublist takes
/// optional parameters "Verbosity Level" (std::string) and
/// "Output File" (std::string). "Verbosity Level" has six valid
/// values: "VERB_DEFAULT", "VERB_NONE", "VERB_LOW",
/// "VERB_MEDIUM", "VERB_HIGH", and "VERB_EXTREME", with
/// increasing verbosity starting with "VERB_NONE". "Output File"
/// is the name of a file to use for output; "none" means don't
/// open a file, but write to the default output stream.
class Distributor :
public Teuchos::Describable,
public Teuchos::ParameterListAcceptorDefaultBase,
public Teuchos::VerboseObject<Distributor> {
public:
//! @name Constructors and destructor
//@{
/// \brief Construct using the specified communicator and default parameters.
///
/// \param comm [in] Communicator used by the Distributor.
///
/// The constructor doesn't actually set up the distribution
/// pattern. You need to call one of the "gather / scatter
/// 'constructors'" to do that.
explicit Distributor (const Teuchos::RCP<const Teuchos::Comm<int> >& comm);
/// \brief Construct using the specified communicator and default
/// parameters, with an output stream
///
/// \param comm [in] Communicator used by the Distributor.
/// \param out [in/out] Output stream (for debugging output).
///
/// The constructor doesn't actually set up the distribution
/// pattern. You need to call one of the "gather / scatter
/// 'constructors'" to do that.
Distributor (const Teuchos::RCP<const Teuchos::Comm<int> >& comm,
const Teuchos::RCP<Teuchos::FancyOStream>& out);
/// \brief Construct using the specified communicator and ParameterList.
///
/// \param comm [in] Communicator used by the Distributor.
///
/// \param plist [in/out] List of parameters controlling how the
/// Distributor performs communication. Must be nonnull.
/// Please see the class documentation for a list of all
/// accepted parameters and their default values.
///
/// The constructor doesn't actually set up the distribution
/// pattern. You need to call one of the "gather / scatter
/// 'constructors'" to do that.
Distributor (const Teuchos::RCP<const Teuchos::Comm<int> >& comm,
const Teuchos::RCP<Teuchos::ParameterList>& plist);
/// \brief Construct using the specified communicator and
/// ParameterList, with an output stream
///
/// \param comm [in] Communicator used by the Distributor.
/// \param out [in/out] Output stream (for debugging output).
///
/// \param plist [in/out] List of parameters controlling how the
/// Distributor performs communication. Must be nonnull.
/// Please see the class documentation for a list of all
/// accepted parameters and their default values.
///
/// The constructor doesn't actually set up the distribution
/// pattern. You need to call one of the "gather / scatter
/// 'constructors'" to do that.
Distributor (const Teuchos::RCP<const Teuchos::Comm<int> >& comm,
const Teuchos::RCP<Teuchos::FancyOStream>& out,
const Teuchos::RCP<Teuchos::ParameterList>& plist);
//! Copy constructor.
Distributor (const Distributor &distributor);
//! Destructor (virtual for memory safety).
virtual ~Distributor ();
/// \brief Swap the contents of rhs with those of *this.
///
/// This is useful in Import's setUnion() method. It avoids the
/// overhead of copying arrays, since it can use std::swap on the
/// arrays.
void swap (Distributor& rhs);
//@}
//! @name Implementation of ParameterListAcceptorDefaultBase
//@{
/// \brief Set Distributor parameters.
///
/// Please see the class documentation for a list of all accepted
/// parameters and their default values.
void setParameterList (const Teuchos::RCP<Teuchos::ParameterList>& plist);
/// \brief List of valid Distributor parameters.
///
/// Please see the class documentation for a list of all accepted
/// parameters and their default values.
Teuchos::RCP<const Teuchos::ParameterList> getValidParameters () const;
//@}
//! \name Gather / scatter "constructors"
//@{
/// \brief Set up Distributor using list of process ranks to which
/// this process will send.
///
/// Take a list of process ranks and construct a plan for
/// efficiently scattering to those processes. Return the number
/// of processes which will send me (the calling process) data.
///
/// \param exportNodeIDs [in] List of ranks of the processes that
/// will get the exported data. If there is a process rank
/// greater than or equal to the number of processes, all
/// processes will throw an <tt>std::runtime_error</tt>
/// exception. Process ranks less than zero are ignored; their
/// placement corresponds to null sends in any future
/// exports. That is, if <tt>exportNodeIDs[0] == -1</tt>, then
/// the corresponding position in the export array is ignored
/// during a call to doPosts() or doPostsAndWaits(). For this
/// reason, a negative entry is sufficient to break contiguity.
///
/// \return Number of imports this process will be receiving.
size_t createFromSends (const ArrayView<const int>& exportNodeIDs);
/// \brief Set up Distributor using list of process ranks from which to receive.
///
/// Take a list of process ranks and construct a plan for
/// efficiently scattering to those processes. Return the number
/// and list of IDs being sent by me (the calling process).
///
/// Import invokes this method in order to create a Distributor
/// from a list of receive neighbors and IDs. A common use case
/// for this process is setting up sends and receives for the
/// remote entries of the source vector in a distributed sparse
/// matrix-vector multiply. The Mantevo HPCCG miniapp shows an
/// annotated and simplified version of this process for that
/// special case.
///
/// \param remoteIDs [in] List of remote IDs wanted.
///
/// \param remoteNodeIDs [in] The ranks of the process that will
/// send the remote IDs listed in \c remoteIDs. Process ranks
/// less than zero are ignored; their placement corresponds to
/// null sends in any future exports. If there is a process
/// rank greater than or equal to the number of processes, all
/// processes will throw an <tt>std::runtime_error</tt>
/// exception.
///
/// \param exportIDs [out] List of IDs that need to be sent from
/// this process.
///
/// \param exportNodeIDs [out] The ranks of the processes that
/// will get the exported IDs in \c exportIDs.
///
/// The \c exportGIDs and \c exportNodeIDs arrays are resized by
/// the Distributor, which is why they are passed in as a nonconst
/// Array reference.
template <class Ordinal>
void
createFromRecvs (const ArrayView<const Ordinal>& remoteIDs,
const ArrayView<const int>& remoteNodeIDs,
Array<Ordinal>& exportIDs,
Array<int>& exportNodeIDs);
//@}
//! @name Attribute accessor methods
//@{
/// \brief The number of processes from which we will receive data.
///
/// The count does <i>not</i> include the calling process.
size_t getNumReceives() const;
/// \brief The number of processes to which we will send data.
///
/// The count does <i>not</i> include the calling process.
size_t getNumSends() const;
//! Whether the calling process will send or receive messages to itself.
bool hasSelfMessage() const;
//! Maximum number of values this process will send to another single process.
size_t getMaxSendLength() const;
//! Total number of values this process will receive from other processes.
size_t getTotalReceiveLength() const;
/// \brief Ranks of the processes sending values to this process.
///
/// This is a nonpersisting view. It will last only as long as
/// this Distributor instance does.
ArrayView<const int> getImagesFrom() const;
/// \brief Ranks of the processes to which this process will send values.
///
/// This is a nonpersisting view. It will last only as long as
/// this Distributor instance does.
ArrayView<const int> getImagesTo() const;
/// \brief Number of values this process will receive from each process.
///
/// This process will receive <tt>getLengthsFrom[i]</tt> values
/// from process <tt>getImagesFrom[i]</tt>.
///
/// This is a nonpersisting view. It will last only as long as
/// this Distributor instance does.
ArrayView<const size_t> getLengthsFrom() const;
/// \brief Number of values this process will send to each process.
///
/// This process will send <tt>getLengthsTo[i]</tt> values to
/// process <tt>getImagesTo[i]</tt>.
///
/// This is a nonpersisting view. It will last only as long as
/// this Distributor instance does.
ArrayView<const size_t> getLengthsTo() const;
/// \brief Return an enum indicating whether and how a Distributor was initialized.
///
/// This is an implementation detail of Tpetra. Please do not
/// call this method or rely on it existing in your code.
Details::EDistributorHowInitialized howInitialized () const {
return howInitialized_;
}
//@}
//! @name Reverse communication methods
//@{
/// \brief A reverse communication plan Distributor.
///
/// The first time this method is called, it creates a Distributor
/// with the reverse communication plan of <tt>*this</tt>. On
/// subsequent calls, it returns the cached reverse Distributor.
///
/// Most users do not need to call this method. If you invoke
/// doReversePosts() or doReversePostsAndWaits(), the reverse
/// Distributor will be created automatically if it does not yet
/// exist.
RCP<Distributor> getReverse() const;
//@}
//! @name Methods for executing a communication plan
//@{
/// \brief Execute the (forward) communication plan.
///
/// Call this version of the method when you have the same number
/// of Packets for each LID (local ID) to send or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Contains the values to be sent by this
/// process. On exit from this method, it's OK to modify the
/// entries of this buffer.
///
/// \param numPackets [in] The number of Packets per export /
/// import. This version of the routine assumes that each LID
/// has the same number of Packets associated with it. (\c
/// MultiVector is an example of a DistObject subclass
/// satisfying this property.)
///
/// \param imports [out] On entry, buffer must be large enough to
/// accomodate the data exported (sent) to us. On exit,
/// contains the values exported to us.
template <class Packet>
void
doPostsAndWaits (const ArrayView<const Packet> &exports,
size_t numPackets,
const ArrayView<Packet> &imports);
/// \brief Execute the (forward) communication plan.
///
/// Call this version of the method when you have possibly
/// different numbers of Packets for each LID (local ID) to send
/// or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Contains the values to be sent by this
/// process. On exit from this method, it's OK to modify the
/// entries of this buffer.
///
/// \param numExportPacketsPerLID [in] The number of packets for
/// each export LID (i.e., each LID to be sent).
///
/// \param imports [out] On entry, buffer must be large enough to
/// accomodate the data exported (sent) to us. On exit,
/// contains the values exported to us.
///
/// \param numImportPacketsPerLID [in] The number of packets for
/// each import LID (i.e., each LID to be received).
template <class Packet>
void
doPostsAndWaits (const ArrayView<const Packet> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const ArrayView<Packet> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// \brief Post the data for a forward plan, but do not execute the waits yet.
///
/// Call this overload when you have the same number of Packets
/// for each LID to send or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Contains the values to be sent by this
/// process. This is an ArrayRCP and not an ArrayView so that
/// we have the freedom to use nonblocking sends if we wish. Do
/// not modify the data in this array until \c doWaits() has
/// completed.
///
/// \param numPackets [in] The number of Packets per export /
/// import. (Same as the three-argument version of
/// doPostsAndWaits().)
///
/// \param imports [out] On entry, buffer must be large enough to
/// accomodate the data exported (sent) to us. This is an
/// ArrayRCP and not an ArrayView so that we have the freedom to
/// use nonblocking sends if we wish. Do not modify the data in
/// this array until \c doWaits() has completed. Upon
/// completion of \c doWaits(), this buffer contains the values
/// exported to us.
template <class Packet>
void
doPosts (const ArrayRCP<const Packet> &exports,
size_t numPackets,
const ArrayRCP<Packet> &imports);
/// \brief Post the data for a forward plan, but do not execute the waits yet.
///
/// Call this overload when you have possibly different numbers of
/// Packets for each LID to send or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Same as in the three-argument version of
/// \c doPosts().
///
/// \param numExportPacketsPerLID [in] Same as in the
/// four-argument version of \c doPostsAndWaits().
///
/// \param imports [out] Same as in the three-argument version of
/// \c doPosts().
///
/// \param numImportPacketsPerLID [in] Same as in the
/// four-argument version of \c doPostsAndWaits().
template <class Packet>
void
doPosts (const ArrayRCP<const Packet> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const ArrayRCP<Packet> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// Wait on any outstanding nonblocking message requests to complete.
///
/// This method is for forward mode communication only, that is,
/// after calling doPosts(). For reverse mode communication
/// (after calling doReversePosts()), call doReverseWaits()
/// instead.
void doWaits ();
/// \brief Execute the reverse communication plan.
///
/// This method takes the same arguments as the three-argument
/// version of \c doPostsAndWaits().
template <class Packet>
void
doReversePostsAndWaits (const ArrayView<const Packet> &exports,
size_t numPackets,
const ArrayView<Packet> &imports);
/// \brief Execute the reverse communication plan.
///
/// This method takes the same arguments as the four-argument
/// version of \c doPostsAndWaits().
template <class Packet>
void
doReversePostsAndWaits (const ArrayView<const Packet> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const ArrayView<Packet> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// \brief Post the data for a reverse plan, but do not execute the waits yet.
///
/// This method takes the same arguments as the three-argument
/// version of \c doPosts().
template <class Packet>
void
doReversePosts (const ArrayRCP<const Packet> &exports,
size_t numPackets,
const ArrayRCP<Packet> &imports);
/// \brief Post the data for a reverse plan, but do not execute the waits yet.
///
/// This method takes the same arguments as the four-argument
/// version of \c doPosts().
template <class Packet>
void
doReversePosts (const ArrayRCP<const Packet> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const ArrayRCP<Packet> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// Wait on any outstanding nonblocking message requests to complete.
///
/// This method is for reverse mode communication only, that is,
/// after calling doReversePosts(). For forward mode
/// communication (after calling doPosts()), call doWaits()
/// instead.
void doReverseWaits ();
/// \brief Execute the (forward) communication plan.
///
/// Call this version of the method when you have the same number
/// of Packets for each LID (local ID) to send or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Contains the values to be sent by this
/// process. On exit from this method, it's OK to modify the
/// entries of this buffer.
///
/// \param numPackets [in] The number of Packets per export /
/// import. This version of the routine assumes that each LID
/// has the same number of Packets associated with it. (\c
/// MultiVector is an example of a DistObject subclass
/// satisfying this property.)
///
/// \param imports [out] On entry, buffer must be large enough to
/// accomodate the data exported (sent) to us. On exit,
/// contains the values exported to us.
template <class Packet, class Layout, class Device, class Mem>
void
doPostsAndWaits (
const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports);
/// \brief Execute the (forward) communication plan.
///
/// Call this version of the method when you have possibly
/// different numbers of Packets for each LID (local ID) to send
/// or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Contains the values to be sent by this
/// process. On exit from this method, it's OK to modify the
/// entries of this buffer.
///
/// \param numExportPacketsPerLID [in] The number of packets for
/// each export LID (i.e., each LID to be sent).
///
/// \param imports [out] On entry, buffer must be large enough to
/// accomodate the data exported (sent) to us. On exit,
/// contains the values exported to us.
///
/// \param numImportPacketsPerLID [in] The number of packets for
/// each import LID (i.e., each LID to be received).
template <class Packet, class Layout, class Device, class Mem>
void
doPostsAndWaits (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// \brief Post the data for a forward plan, but do not execute the waits yet.
///
/// Call this overload when you have the same number of Packets
/// for each LID to send or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Contains the values to be sent by this
/// process. This is an ArrayRCP and not an ArrayView so that
/// we have the freedom to use nonblocking sends if we wish. Do
/// not modify the data in this array until \c doWaits() has
/// completed.
///
/// \param numPackets [in] The number of Packets per export /
/// import. (Same as the three-argument version of
/// doPostsAndWaits().)
///
/// \param imports [out] On entry, buffer must be large enough to
/// accomodate the data exported (sent) to us. This is an
/// ArrayRCP and not an ArrayView so that we have the freedom to
/// use nonblocking sends if we wish. Do not modify the data in
/// this array until \c doWaits() has completed. Upon
/// completion of \c doWaits(), this buffer contains the values
/// exported to us.
template <class Packet, class Layout, class Device, class Mem>
void
doPosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports);
/// \brief Post the data for a forward plan, but do not execute the waits yet.
///
/// Call this overload when you have possibly different numbers of
/// Packets for each LID to send or receive.
///
/// \tparam Packet The type of data to send and receive.
///
/// \param exports [in] Same as in the three-argument version of
/// \c doPosts().
///
/// \param numExportPacketsPerLID [in] Same as in the
/// four-argument version of \c doPostsAndWaits().
///
/// \param imports [out] Same as in the three-argument version of
/// \c doPosts().
///
/// \param numImportPacketsPerLID [in] Same as in the
/// four-argument version of \c doPostsAndWaits().
template <class Packet, class Layout, class Device, class Mem>
void
doPosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// \brief Execute the reverse communication plan.
///
/// This method takes the same arguments as the three-argument
/// version of \c doPostsAndWaits().
template <class Packet, class Layout, class Device, class Mem>
void
doReversePostsAndWaits (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports);
/// \brief Execute the reverse communication plan.
///
/// This method takes the same arguments as the four-argument
/// version of \c doPostsAndWaits().
template <class Packet, class Layout, class Device, class Mem>
void
doReversePostsAndWaits (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// \brief Post the data for a reverse plan, but do not execute the waits yet.
///
/// This method takes the same arguments as the three-argument
/// version of \c doPosts().
template <class Packet, class Layout, class Device, class Mem>
void
doReversePosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports);
/// \brief Post the data for a reverse plan, but do not execute the waits yet.
///
/// This method takes the same arguments as the four-argument
/// version of \c doPosts().
template <class Packet, class Layout, class Device, class Mem>
void
doReversePosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID);
/// \brief Information on the last call to do/doReverse
///
/// Returns the amount of data sent & recv'd on this processor in bytes
void getLastDoStatistics(size_t & bytes_sent, size_t & bytes_recvd) const{
bytes_sent = lastRoundBytesSend_;
bytes_recvd = lastRoundBytesRecv_;
}
//@}
//! @name Implementation of Teuchos::Describable
//@{
//! A simple one-line description of this object.
std::string description() const;
//! Print the object with some verbosity level to an \c FancyOStream.
void describe (Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const;
//@}
private:
//! The communicator over which to perform distributions.
RCP<const Comm<int> > comm_;
//! Output stream for debug output.
Teuchos::RCP<Teuchos::FancyOStream> out_;
//! How the Distributor was initialized (if it was).
Details::EDistributorHowInitialized howInitialized_;
//! @name Parameters read in from the Teuchos::ParameterList
//@{
//! The variant of send to use in do[Reverse]Posts().
Details::EDistributorSendType sendType_;
//! Whether to do a barrier between receives and sends in do[Reverse]Posts().
bool barrierBetween_;
//! Whether to print copious debug output to stderr on all processes.
bool debug_;
//! Whether to use RDMA for MPI communication between CUDA GPUs.
/*!
* This is only relevant if Tpetra was configured to support the new
* experimental DistObject and Distributor implementation using
* Kokkos::View. The default for this parameter is determined by the
* configuration parameter Tpetra_ENABLE_MPI_CUDA_RDMA, which is off
* by default. Thus regardless of how Tpetra was configured, you can
* turn this on/off at run-time by setting the parameter list option
* "Enable MPI CUDA RDMA support" to true.
*/
bool enable_cuda_rdma_;
//@}
/// \brief The number of export process IDs on input to \c createFromSends().
///
/// This may differ from the number of sends. We always want to
/// send either zero or one messages to any process. However, the
/// user may have specified a process ID twice in \c
/// createFromSends()'s input array of process IDs (\c
/// exportNodeIDs). This is allowed, but may affect whether sends
/// require a buffer.
size_t numExports_;
/// \brief Whether I am supposed to send a message to myself.
///
/// This is set in createFromSends or createReverseDistributor.
bool selfMessage_;
/// \brief The number of sends from this process to other process.
///
/// This is always less than or equal to the number of processes.
/// It does <i>not</i> count self receives (that is, messages from
/// the calling process to itself).
///
/// This value is computed by the createFromSends() method. That
/// method first includes self receives in the count, but at the
/// end subtracts one if selfMessage_ is true.
size_t numSends_;
/// \brief List of process IDs to which to send.
///
/// This array has length numSends_ + selfMessage_ (that is, it
/// includes the self message, if there is one).
Array<int> imagesTo_;
/// \brief Starting index of the block of Packets to send to each process.
///
/// Given an export buffer that contains all of the data being
/// sent by this process, the block of Packets to send to process
/// p will start at position startsTo_[p].
///
/// This array has length numSends_ + selfMessage_ (that is, it
/// includes the self message, if there is one).
Array<size_t> startsTo_;
/// \brief Length (in number of Packets) of my process' send to each process.
///
/// lengthsTo_[p] is the length of my process' send to process p.
/// This array has length numSends_ + selfMessage_ (that is, it
/// includes the self message, if there is one).
Array<size_t> lengthsTo_;
/// \brief The maximum send length (in number of Packets) to another process.
///
/// maxSendLength_ = max(lengthsTo_[p]) for p != my process rank.
size_t maxSendLength_;
/// \brief Offset (by message, not by number of Packets) into exports array.
///
/// This array is used by both versions of doPosts(). In that
/// method, <tt>indicesTo_[j]*numPackets</tt> is the offset into
/// the <tt>exports</tt> array, where <tt>j = startsTo_[p]</tt>
/// and p is an index iterating through the sends in reverse order
/// (starting with the process rank right before the self message,
/// if there is a self message, else the largest process rank to
/// which this process sends).
///
/// This array is only used if export data are not blocked (laid
/// out) by process rank, that is, if we need to use a send
/// buffer. Otherwise, this array has no entries. (In fact,
/// Distributor currently uses this in both overloads of doPosts()
/// to test whether data are laid out by process.)
Array<size_t> indicesTo_;
/// \brief The number of messages received by my process from other processes.
///
/// This does <i>not</i> count self receives. If selfMessage_ is
/// true, the actual number of receives is one more (we assume
/// that we only receive zero or one messages from ourself).
///
/// This value is computed by the \c computeReceives() method.
/// That method first includes self receives in the count, but at
/// the end subtracts one if selfMessage_ is true.
size_t numReceives_;
/// \brief sum(lengthsFrom_)
///
/// This is computed by \c createFromSends() and is used to
/// allocate the receive buffer. The reverse communicator's total
/// receive length is the total send length of the forward
/// communicator.
size_t totalReceiveLength_;
/// \brief Array of lengths of incoming messages.
///
/// This array has length numReceives_ + selfMessage_. Incoming
/// message i from process imagesFrom_[i] has length
/// lengthsFrom_[i].
Array<size_t> lengthsFrom_;
/// \brief Array of ranks of the process from which the calling
/// process will receive a message.
///
/// This array has length numReceives_ + selfMessage_. Incoming
/// message i was sent by process imagesFrom_[i].
Array<int> imagesFrom_;
/// \brief Array of offsets of incoming messages.
///
/// This array has length numReceives_ + selfMessage_. It is an
/// exclusive prefix sum of lengthsFrom_. It is only used for
/// constructing the reverse Distributor.
Array<size_t> startsFrom_;
/// \brief List that becomes the reverse communicator's indicesTo_.
///
/// Array of length totalReceiveLength_. Allocated and filled in
/// computeReceives() as [0, 1, ..., totalReceiveLength_-1]. When
/// creating the reverse Distributor, this is assigned to the
/// reverse Distributor's indicesTo_.
Array<size_t> indicesFrom_;
/// \brief Communication requests associated with nonblocking receives and sends.
///
/// \note To implementers: Distributor uses requests_.size() as
/// the number of outstanding nonblocking receives and sends.
/// This means you should always resize to zero after completing
/// receive and send requests.
Array<RCP<Teuchos::CommRequest<int> > > requests_;
/// \brief The reverse distributor.
///
/// This is created on demand in \c getReverse() and cached for
/// later reuse. This is why it is declared "mutable".
mutable RCP<Distributor> reverseDistributor_;
/// \brief The number of bytes sent by this proc in the last call to do/doReverse
size_t lastRoundBytesSend_;
/// \brief The number of bytes received by this proc in the last call to do/doReverse
size_t lastRoundBytesRecv_;
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::RCP<Teuchos::Time> timer_doPosts3_;
Teuchos::RCP<Teuchos::Time> timer_doPosts4_;
Teuchos::RCP<Teuchos::Time> timer_doWaits_;
Teuchos::RCP<Teuchos::Time> timer_doPosts3_recvs_;
Teuchos::RCP<Teuchos::Time> timer_doPosts4_recvs_;
Teuchos::RCP<Teuchos::Time> timer_doPosts3_barrier_;
Teuchos::RCP<Teuchos::Time> timer_doPosts4_barrier_;
Teuchos::RCP<Teuchos::Time> timer_doPosts3_sends_;
Teuchos::RCP<Teuchos::Time> timer_doPosts4_sends_;
//! Make the instance's timers. (Call only in constructor.)
void makeTimers ();
#endif // TPETRA_DISTRIBUTOR_TIMERS
/// \brief Whether to use different tags for different code paths.
///
/// There are currently three code paths in Distributor that post
/// receives and sends:
///
/// 1. Three-argument variant of doPosts()
/// 2. Four-argument variant of doPosts()
/// 3. computeReceives()
///
/// If this option is true, Distributor will use a distinct
/// message tag for each of these paths.
bool useDistinctTags_;
//! Get the tag to use for receives and sends.
///
/// See useDistinctTags_. This is called in doPosts() (both
/// variants) and computeReceives().
int getTag (const int pathTag) const;
/// \brief Initialize using the specified communicator and ParameterList.
///
/// This method is only meant to be called by the constructor.
///
/// \param comm [in] Communicator used by the Distributor.
/// \param plist [in/out] List of parameters controlling how the
/// Distributor performs communication. Must be nonnull.
/// Please see the class documentation for a list of all
/// accepted parameters and their default values.
///
/// This method doesn't actually set up the distribution pattern.
/// You need to call one of the "gather / scatter 'constructors'"
/// to do that.
void
init (const Teuchos::RCP<const Teuchos::Comm<int> >& comm,
const Teuchos::RCP<Teuchos::ParameterList>& plist);
/// \brief Compute receive info from sends.
///
/// This method computes numReceives_, lengthsFrom_, imagesFrom_,
/// totalReceiveLength_, indicesFrom_, and startsFrom_.
///
/// \note This method currently ignores the sendType_ and
/// barrierBetween_ parameters, and always uses ireceive() /
/// send() for communication of the process IDs from which our
/// process is receiving and their corresponding receive packet
/// counts.
void computeReceives ();
/// \brief Compute send (GID,PID) pairs from receive (GID,PID) pairs.
///
/// GID means "global ID" and PID means "process ID" (rank, in MPI
/// terms).
///
/// \param importIDs [in] GIDs to receive by my process.
/// \param importNodeIDs [in] Process IDs from which to receive by
/// my process.
/// \param exportIDs [out] GIDs to send by my process. Resized if
/// necessary.
/// \param exportNodeIDs [out] Process IDs to which to send by my
/// process. Resized if necessary.
template <class Ordinal>
void computeSends (const ArrayView<const Ordinal> &importIDs,
const ArrayView<const int> &importNodeIDs,
Array<Ordinal> &exportIDs,
Array<int> &exportNodeIDs);
//! Create a distributor for the reverse communication pattern.
void createReverseDistributor() const;
}; // class Distributor
template <class Packet>
void Distributor::
doPostsAndWaits (const ArrayView<const Packet>& exports,
size_t numPackets,
const ArrayView<Packet>& imports)
{
using Teuchos::arcp;
using Teuchos::ArrayRCP;
typedef typename ArrayRCP<const Packet>::size_type size_type;
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::runtime_error, "Tpetra::Distributor::"
"doPostsAndWaits(3 args): There are " << requests_.size () <<
" outstanding nonblocking messages pending. It is incorrect to call "
"this method with posts outstanding.");
// doPosts() accepts the exports and imports arrays as ArrayRCPs,
// requiring that the memory location is persisting (as is
// necessary for nonblocking receives). However, it need only
// persist until doWaits() completes, so it is safe for us to use
// a nonpersisting reference in this case. The use of a
// nonpersisting reference is purely a performance optimization.
//const Packet* exportsPtr = exports.getRawPtr();
//ArrayRCP<const Packet> exportsArcp (exportsPtr, static_cast<size_type> (0),
// exports.size(), false);
ArrayRCP<const Packet> exportsArcp (exports.getRawPtr (),
static_cast<size_type> (0),
exports.size(), false);
// For some reason, neither of the options below (that use arcp)
// compile for Packet=std::complex<double> with GCC 4.5.1. The
// issue only arises with the exports array. This is why we
// construct a separate nonowning ArrayRCP.
// doPosts (arcp<const Packet> (exports.getRawPtr(), 0, exports.size(), false),
// numPackets,
// arcp<Packet> (imports.getRawPtr(), 0, imports.size(), false));
// doPosts (arcp<const Packet> (exportsPtr, 0, exports.size(), false),
// numPackets,
// arcp<Packet> (imports.getRawPtr(), 0, imports.size(), false));
doPosts (exportsArcp,
numPackets,
arcp<Packet> (imports.getRawPtr (), 0, imports.size (), false));
doWaits ();
lastRoundBytesSend_ = exports.size () * sizeof (Packet);
lastRoundBytesRecv_ = imports.size () * sizeof (Packet);
}
template <class Packet>
void Distributor::
doPostsAndWaits (const ArrayView<const Packet>& exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const ArrayView<Packet> &imports,
const ArrayView<size_t> &numImportPacketsPerLID)
{
using Teuchos::arcp;
using Teuchos::ArrayRCP;
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::runtime_error, "Tpetra::Distributor::"
"doPostsAndWaits: There are " << requests_.size () << " outstanding "
"nonblocking messages pending. It is incorrect to call doPostsAndWaits "
"with posts outstanding.");
// doPosts() accepts the exports and imports arrays as ArrayRCPs,
// requiring that the memory location is persisting (as is
// necessary for nonblocking receives). However, it need only
// persist until doWaits() completes, so it is safe for us to use
// a nonpersisting reference in this case.
// mfh 04 Apr 2012: For some reason, calling arcp<const Packet>
// for Packet=std::complex<T> (e.g., T=float) fails to compile
// with some versions of GCC. The issue only arises with the
// exports array. This is why we construct a separate nonowning
// ArrayRCP.
typedef typename ArrayRCP<const Packet>::size_type size_type;
ArrayRCP<const Packet> exportsArcp (exports.getRawPtr (),
static_cast<size_type> (0),
exports.size (), false);
// mfh 04 Apr 2012: This is the offending code. This statement
// would normally be in place of "exportsArcp" in the
// doPosts() call below.
//arcp<const Packet> (exports.getRawPtr(), 0, exports.size(), false),
doPosts (exportsArcp,
numExportPacketsPerLID,
arcp<Packet> (imports.getRawPtr (), 0, imports.size (), false),
numImportPacketsPerLID);
doWaits ();
lastRoundBytesSend_ = exports.size () * sizeof (Packet);
lastRoundBytesRecv_ = imports.size () * sizeof (Packet);
}
template <class Packet>
void Distributor::
doPosts (const ArrayRCP<const Packet>& exports,
size_t numPackets,
const ArrayRCP<Packet>& imports)
{
using Teuchos::Array;
using Teuchos::as;
using Teuchos::FancyOStream;
using Teuchos::includesVerbLevel;
using Teuchos::ireceive;
using Teuchos::isend;
using Teuchos::OSTab;
using Teuchos::readySend;
using Teuchos::send;
using Teuchos::ssend;
using Teuchos::TypeNameTraits;
using Teuchos::typeName;
using std::endl;
typedef Array<size_t>::size_type size_type;
Teuchos::OSTab tab (out_);
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMon (*timer_doPosts3_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// Run-time configurable parameters that come from the input
// ParameterList set by setParameterList().
const Details::EDistributorSendType sendType = sendType_;
const bool doBarrier = barrierBetween_;
// #ifdef HAVE_TEUCHOS_DEBUG
// // Prepare for verbose output, if applicable.
// Teuchos::EVerbosityLevel verbLevel = this->getVerbLevel ();
// (void) verbLevel; // Silence "unused variable" compiler warning.
// RCP<FancyOStream> out = this->getOStream ();
// // const bool doPrint = out.get () && (comm_->getRank () == 0) &&
// // includesVerbLevel (verbLevel, Teuchos::VERB_EXTREME, true);
// const bool doPrint = out.get () && (comm_->getRank () == 0);
// if (doPrint) {
// // Only need one process to print out parameters.
// *out << "Distributor::doPosts (3 args)" << endl;
// }
// // Add one tab level. We declare this outside the doPrint scopes
// // so that the tab persists until the end of this method.
// OSTab tab = this->getOSTab ();
// if (doPrint) {
// *out << "Parameters:" << endl;
// {
// OSTab tab2 (out);
// *out << "sendType: " << DistributorSendTypeEnumToString (sendType)
// << endl << "barrierBetween: " << doBarrier << endl;
// }
// }
// #endif // HAVE_TEUCHOS_DEBUG
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_RSEND && ! doBarrier, std::logic_error,
"Tpetra::Distributor::doPosts(3 args): Ready-send version requires a "
"barrier between posting receives and posting ready sends. This should "
"have been checked before. "
"Please report this bug to the Tpetra developers.");
const int myImageID = comm_->getRank ();
size_t selfReceiveOffset = 0;
// Each message has the same number of packets.
//
// FIXME (mfh 18 Jul 2014): Relaxing this test from strict
// inequality to a less-than seems to have fixed Bug 6170. It's
// OK for the 'imports' array to be longer than it needs to be;
// I'm just curious why it would be.
const size_t totalNumImportPackets = totalReceiveLength_ * numPackets;
TEUCHOS_TEST_FOR_EXCEPTION(
static_cast<size_t> (imports.size ()) < totalNumImportPackets,
std::invalid_argument, "Tpetra::Distributor::doPosts(3 args): The "
"'imports' array must have enough entries to hold the expected number "
"of import packets. imports.size() = " << imports.size () << " < "
"totalNumImportPackets = " << totalNumImportPackets << ".");
// MPI tag for nonblocking receives and blocking sends in this
// method. Some processes might take the "fast" path
// (indicesTo_.empty()) and others might take the "slow" path for
// the same doPosts() call, so the path tag must be the same for
// both.
const int pathTag = 0;
const int tag = this->getTag (pathTag);
if (debug_) {
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::logic_error, "Tpetra::Distributor::"
"doPosts(3 args): Process " << myImageID << ": requests_.size() = "
<< requests_.size () << " != 0.");
std::ostringstream os;
os << myImageID << ": doPosts(3,"
<< (indicesTo_.empty () ? "fast" : "slow") << ")" << endl;
*out_ << os.str ();
}
// Distributor uses requests_.size() as the number of outstanding
// nonblocking message requests, so we resize to zero to maintain
// this invariant.
//
// numReceives_ does _not_ include the self message, if there is
// one. Here, we do actually send a message to ourselves, so we
// include any self message in the "actual" number of receives to
// post.
//
// NOTE (mfh 19 Mar 2012): Epetra_MpiDistributor::DoPosts()
// doesn't (re)allocate its array of requests. That happens in
// CreateFromSends(), ComputeRecvs_(), DoReversePosts() (on
// demand), or Resize_().
const size_type actualNumReceives = as<size_type> (numReceives_) +
as<size_type> (selfMessage_ ? 1 : 0);
requests_.resize (0);
// Post the nonblocking receives. It's common MPI wisdom to post
// receives before sends. In MPI terms, this means favoring
// adding to the "posted queue" (of receive requests) over adding
// to the "unexpected queue" (of arrived messages not yet matched
// with a receive).
{
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonRecvs (*timer_doPosts3_recvs_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
size_t curBufOffset = 0;
for (size_type i = 0; i < actualNumReceives; ++i) {
const size_t curBufLen = lengthsFrom_[i] * numPackets;
if (imagesFrom_[i] != myImageID) {
// If my process is receiving these packet(s) from another
// process (not a self-receive):
//
// 1. Set up the persisting view (recvBuf) of the imports
// array, given the offset and size (total number of
// packets from process imagesFrom_[i]).
// 2. Start the Irecv and save the resulting request.
TEUCHOS_TEST_FOR_EXCEPTION(
curBufOffset + curBufLen > static_cast<size_t> (imports.size ()),
std::logic_error, "Tpetra::Distributor::doPosts(3 args): Exceeded "
"size of 'imports' array in packing loop on Process " << myImageID
<< ". imports.size() = " << imports.size () << " < offset + length"
" = " << (curBufOffset + curBufLen) << ".");
ArrayRCP<Packet> recvBuf =
imports.persistingView (curBufOffset, curBufLen);
requests_.push_back (ireceive<int, Packet> (recvBuf, imagesFrom_[i],
tag, *comm_));
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,"
<< (indicesTo_.empty () ? "fast" : "slow") << "): "
<< "Posted irecv from Proc " << imagesFrom_[i] << " with "
"specified tag " << tag << endl;
*out_ << os.str ();
}
}
else { // Receiving from myself
selfReceiveOffset = curBufOffset; // Remember the self-recv offset
}
curBufOffset += curBufLen;
}
}
if (doBarrier) {
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonBarrier (*timer_doPosts3_barrier_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// If we are using ready sends (MPI_Rsend) below, we need to do
// a barrier before we post the ready sends. This is because a
// ready send requires that its matching receive has already
// been posted before the send has been posted. The only way to
// guarantee that in this case is to use a barrier.
comm_->barrier ();
}
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonSends (*timer_doPosts3_sends_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// setup scan through imagesTo_ list starting with higher numbered images
// (should help balance message traffic)
//
// FIXME (mfh 20 Feb 2013) Why haven't we precomputed this?
// It doesn't depend on the input at all.
size_t numBlocks = numSends_ + selfMessage_;
size_t imageIndex = 0;
while ((imageIndex < numBlocks) && (imagesTo_[imageIndex] < myImageID)) {
++imageIndex;
}
if (imageIndex == numBlocks) {
imageIndex = 0;
}
size_t selfNum = 0;
size_t selfIndex = 0;
if (indicesTo_.empty()) {
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,fast): posting sends" << endl;
*out_ << os.str ();
}
// Data are already blocked (laid out) by process, so we don't
// need a separate send buffer (besides the exports array).
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID) {
ArrayView<const Packet> tmpSend =
exports.view (startsTo_[p]*numPackets, lengthsTo_[p]*numPackets);
if (sendType == Details::DISTRIBUTOR_SEND) {
send<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
ArrayRCP<const Packet> tmpSendBuf =
exports.persistingView (startsTo_[p] * numPackets,
lengthsTo_[p] * numPackets);
requests_.push_back (isend<int, Packet> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
} else {
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Tpetra::Distributor::doPosts(3 args): "
"Invalid send type. We should never get here. "
"Please report this bug to the Tpetra developers.");
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,fast): "
<< "Posted send to Proc " << imagesTo_[i]
<< " w/ specified tag " << tag << endl;
*out_ << os.str ();
}
}
else { // "Sending" the message to myself
selfNum = p;
}
}
if (selfMessage_) {
// This is how we "send a message to ourself": we copy from
// the export buffer to the import buffer. That saves
// Teuchos::Comm implementations other than MpiComm (in
// particular, SerialComm) the trouble of implementing self
// messages correctly. (To do this right, SerialComm would
// need internal buffer space for messages, keyed on the
// message's tag.)
std::copy (exports.begin()+startsTo_[selfNum]*numPackets,
exports.begin()+startsTo_[selfNum]*numPackets+lengthsTo_[selfNum]*numPackets,
imports.begin()+selfReceiveOffset);
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,fast) done" << endl;
*out_ << os.str ();
}
}
else { // data are not blocked by image, use send buffer
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,slow): posting sends" << endl;
*out_ << os.str ();
}
// FIXME (mfh 05 Mar 2013) This is broken for Isend (nonblocking
// sends), because the buffer is only long enough for one send.
ArrayRCP<Packet> sendArray (maxSendLength_ * numPackets); // send buffer
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_ISEND, std::logic_error,
"Tpetra::Distributor::doPosts(3 args): The \"send buffer\" code path "
<< "doesn't currently work with nonblocking sends.");
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID) {
typename ArrayView<const Packet>::iterator srcBegin, srcEnd;
size_t sendArrayOffset = 0;
size_t j = startsTo_[p];
for (size_t k = 0; k < lengthsTo_[p]; ++k, ++j) {
srcBegin = exports.begin() + indicesTo_[j]*numPackets;
srcEnd = srcBegin + numPackets;
std::copy (srcBegin, srcEnd, sendArray.begin()+sendArrayOffset);
sendArrayOffset += numPackets;
}
ArrayView<const Packet> tmpSend =
sendArray.view (0, lengthsTo_[p]*numPackets);
if (sendType == Details::DISTRIBUTOR_SEND) {
send<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
ArrayRCP<const Packet> tmpSendBuf =
sendArray.persistingView (0, lengthsTo_[p] * numPackets);
requests_.push_back (isend<int, Packet> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else {
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Tpetra::Distributor::doPosts(3 args): "
"Invalid send type. We should never get here. "
"Please report this bug to the Tpetra developers.");
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,slow): "
<< "Posted send to Proc " << imagesTo_[i]
<< " w/ specified tag " << tag << endl;
*out_ << os.str ();
}
}
else { // "Sending" the message to myself
selfNum = p;
selfIndex = startsTo_[p];
}
}
if (selfMessage_) {
for (size_t k = 0; k < lengthsTo_[selfNum]; ++k) {
std::copy (exports.begin()+indicesTo_[selfIndex]*numPackets,
exports.begin()+indicesTo_[selfIndex]*numPackets + numPackets,
imports.begin() + selfReceiveOffset);
++selfIndex;
selfReceiveOffset += numPackets;
}
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,slow) done" << endl;
*out_ << os.str ();
}
}
}
template <class Packet>
void Distributor::
doPosts (const ArrayRCP<const Packet>& exports,
const ArrayView<size_t>& numExportPacketsPerLID,
const ArrayRCP<Packet>& imports,
const ArrayView<size_t>& numImportPacketsPerLID)
{
using Teuchos::Array;
using Teuchos::as;
using Teuchos::ireceive;
using Teuchos::isend;
using Teuchos::readySend;
using Teuchos::send;
using Teuchos::ssend;
using Teuchos::TypeNameTraits;
#ifdef HAVE_TEUCHOS_DEBUG
using Teuchos::OSTab;
#endif // HAVE_TEUCHOS_DEBUG
using std::endl;
typedef Array<size_t>::size_type size_type;
Teuchos::OSTab tab (out_);
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMon (*timer_doPosts4_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// Run-time configurable parameters that come from the input
// ParameterList set by setParameterList().
const Details::EDistributorSendType sendType = sendType_;
const bool doBarrier = barrierBetween_;
// #ifdef HAVE_TEUCHOS_DEBUG
// // Prepare for verbose output, if applicable.
// Teuchos::EVerbosityLevel verbLevel = this->getVerbLevel ();
// RCP<Teuchos::FancyOStream> out = this->getOStream ();
// const bool doPrint = out.get () && (comm_->getRank () == 0) &&
// includesVerbLevel (verbLevel, Teuchos::VERB_EXTREME, true);
// if (doPrint) {
// // Only need one process to print out parameters.
// *out << "Distributor::doPosts (4 args)" << endl;
// }
// // Add one tab level. We declare this outside the doPrint scopes
// // so that the tab persists until the end of this method.
// Teuchos::OSTab tab = this->getOSTab ();
// if (doPrint) {
// *out << "Parameters:" << endl;
// {
// OSTab tab2 (out);
// *out << "sendType: " << DistributorSendTypeEnumToString (sendType)
// << endl << "barrierBetween: " << doBarrier << endl;
// }
// }
// #endif // HAVE_TEUCHOS_DEBUG
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_RSEND && ! doBarrier, std::logic_error,
"Tpetra::Distributor::doPosts(4 args): Ready-send version requires a "
"barrier between posting receives and posting ready sends. This should "
"have been checked before. "
"Please report this bug to the Tpetra developers.");
const int myImageID = comm_->getRank ();
size_t selfReceiveOffset = 0;
#ifdef HAVE_TEUCHOS_DEBUG
// Different messages may have different numbers of packets.
size_t totalNumImportPackets = 0;
for (int ii = 0; ii < numImportPacketsPerLID.size(); ++ii) {
totalNumImportPackets += numImportPacketsPerLID[ii];
}
TEUCHOS_TEST_FOR_EXCEPTION(
static_cast<size_t> (imports.size ()) < totalNumImportPackets,
std::runtime_error, "Tpetra::Distributor::doPosts(4 args): The 'imports' "
"array must have enough entries to hold the expected number of import "
"packets. imports.size() = " << imports.size() << " < "
"totalNumImportPackets = " << totalNumImportPackets << ".");
#endif // HAVE_TEUCHOS_DEBUG
// MPI tag for nonblocking receives and blocking sends in this
// method. Some processes might take the "fast" path
// (indicesTo_.empty()) and others might take the "slow" path for
// the same doPosts() call, so the path tag must be the same for
// both.
const int pathTag = 1;
const int tag = this->getTag (pathTag);
if (debug_) {
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::logic_error, "Tpetra::Distributor::"
"doPosts(4 args): Process " << myImageID << ": requests_.size() = "
<< requests_.size () << " != 0.");
std::ostringstream os;
os << myImageID << ": doPosts(4,"
<< (indicesTo_.empty () ? "fast" : "slow") << ")" << endl;
*out_ << os.str ();
}
// Distributor uses requests_.size() as the number of outstanding
// nonblocking message requests, so we resize to zero to maintain
// this invariant.
//
// numReceives_ does _not_ include the self message, if there is
// one. Here, we do actually send a message to ourselves, so we
// include any self message in the "actual" number of receives to
// post.
//
// NOTE (mfh 19 Mar 2012): Epetra_MpiDistributor::DoPosts()
// doesn't (re)allocate its array of requests. That happens in
// CreateFromSends(), ComputeRecvs_(), DoReversePosts() (on
// demand), or Resize_().
const size_type actualNumReceives = as<size_type> (numReceives_) +
as<size_type> (selfMessage_ ? 1 : 0);
requests_.resize (0);
// Post the nonblocking receives. It's common MPI wisdom to post
// receives before sends. In MPI terms, this means favoring
// adding to the "posted queue" (of receive requests) over adding
// to the "unexpected queue" (of arrived messages not yet matched
// with a receive).
{
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonRecvs (*timer_doPosts4_recvs_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
size_t curBufferOffset = 0;
size_t curLIDoffset = 0;
for (size_type i = 0; i < actualNumReceives; ++i) {
size_t totalPacketsFrom_i = 0;
for (size_t j = 0; j < lengthsFrom_[i]; ++j) {
totalPacketsFrom_i += numImportPacketsPerLID[curLIDoffset+j];
}
curLIDoffset += lengthsFrom_[i];
if (imagesFrom_[i] != myImageID && totalPacketsFrom_i) {
// If my process is receiving these packet(s) from another
// process (not a self-receive), and if there is at least
// one packet to receive:
//
// 1. Set up the persisting view (recvBuf) into the imports
// array, given the offset and size (total number of
// packets from process imagesFrom_[i]).
// 2. Start the Irecv and save the resulting request.
ArrayRCP<Packet> recvBuf =
imports.persistingView (curBufferOffset, totalPacketsFrom_i);
requests_.push_back (ireceive<int, Packet> (recvBuf, imagesFrom_[i],
tag, *comm_));
}
else { // Receiving these packet(s) from myself
selfReceiveOffset = curBufferOffset; // Remember the offset
}
curBufferOffset += totalPacketsFrom_i;
}
}
if (doBarrier) {
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonBarrier (*timer_doPosts4_barrier_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// If we are using ready sends (MPI_Rsend) below, we need to do
// a barrier before we post the ready sends. This is because a
// ready send requires that its matching receive has already
// been posted before the send has been posted. The only way to
// guarantee that in this case is to use a barrier.
comm_->barrier ();
}
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonSends (*timer_doPosts4_sends_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// setup arrays containing starting-offsets into exports for each send,
// and num-packets-to-send for each send.
Array<size_t> sendPacketOffsets(numSends_,0), packetsPerSend(numSends_,0);
size_t maxNumPackets = 0;
size_t curPKToffset = 0;
for (size_t pp=0; pp<numSends_; ++pp) {
sendPacketOffsets[pp] = curPKToffset;
size_t numPackets = 0;
for (size_t j=startsTo_[pp]; j<startsTo_[pp]+lengthsTo_[pp]; ++j) {
numPackets += numExportPacketsPerLID[j];
}
if (numPackets > maxNumPackets) maxNumPackets = numPackets;
packetsPerSend[pp] = numPackets;
curPKToffset += numPackets;
}
// setup scan through imagesTo_ list starting with higher numbered images
// (should help balance message traffic)
size_t numBlocks = numSends_+ selfMessage_;
size_t imageIndex = 0;
while ((imageIndex < numBlocks) && (imagesTo_[imageIndex] < myImageID)) {
++imageIndex;
}
if (imageIndex == numBlocks) {
imageIndex = 0;
}
size_t selfNum = 0;
size_t selfIndex = 0;
if (indicesTo_.empty()) {
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,fast): posting sends" << endl;
*out_ << os.str ();
}
// Data are already blocked (laid out) by process, so we don't
// need a separate send buffer (besides the exports array).
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID && packetsPerSend[p] > 0) {
ArrayView<const Packet> tmpSend =
exports.view (sendPacketOffsets[p], packetsPerSend[p]);
if (sendType == Details::DISTRIBUTOR_SEND) { // the default, so put it first
send<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
ArrayRCP<const Packet> tmpSendBuf =
exports.persistingView (sendPacketOffsets[p], packetsPerSend[p]);
requests_.push_back (isend<int, Packet> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else {
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Tpetra::Distributor::doPosts(4 args): "
"Invalid send type. We should never get here. Please report "
"this bug to the Tpetra developers.");
}
}
else { // "Sending" the message to myself
selfNum = p;
}
}
if (selfMessage_) {
std::copy (exports.begin()+sendPacketOffsets[selfNum],
exports.begin()+sendPacketOffsets[selfNum]+packetsPerSend[selfNum],
imports.begin()+selfReceiveOffset);
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,fast) done" << endl;
*out_ << os.str ();
}
}
else { // data are not blocked by image, use send buffer
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,slow): posting sends" << endl;
*out_ << os.str ();
}
// FIXME (mfh 05 Mar 2013) This may be broken for Isend.
ArrayRCP<Packet> sendArray (maxNumPackets); // send buffer
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_ISEND, std::logic_error,
"Tpetra::Distributor::doPosts(3 args): The \"send buffer\" "
"code path may not necessarily work with nonblocking sends.");
Array<size_t> indicesOffsets (numExportPacketsPerLID.size(), 0);
size_t ioffset = 0;
for (int j=0; j<numExportPacketsPerLID.size(); ++j) {
indicesOffsets[j] = ioffset;
ioffset += numExportPacketsPerLID[j];
}
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID) {
typename ArrayView<const Packet>::iterator srcBegin, srcEnd;
size_t sendArrayOffset = 0;
size_t j = startsTo_[p];
size_t numPacketsTo_p = 0;
for (size_t k = 0; k < lengthsTo_[p]; ++k, ++j) {
srcBegin = exports.begin() + indicesOffsets[j];
srcEnd = srcBegin + numExportPacketsPerLID[j];
numPacketsTo_p += numExportPacketsPerLID[j];
std::copy (srcBegin, srcEnd, sendArray.begin()+sendArrayOffset);
sendArrayOffset += numExportPacketsPerLID[j];
}
if (numPacketsTo_p > 0) {
ArrayView<const Packet> tmpSend =
sendArray.view (0, numPacketsTo_p);
if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
ArrayRCP<const Packet> tmpSendBuf =
sendArray.persistingView (0, numPacketsTo_p);
requests_.push_back (isend<int, Packet> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else { // if (sendType == Details::DISTRIBUTOR_SSEND)
send<int, Packet> (tmpSend.getRawPtr (),
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
}
}
else { // "Sending" the message to myself
selfNum = p;
selfIndex = startsTo_[p];
}
}
if (selfMessage_) {
for (size_t k = 0; k < lengthsTo_[selfNum]; ++k) {
std::copy (exports.begin()+indicesOffsets[selfIndex],
exports.begin()+indicesOffsets[selfIndex]+numExportPacketsPerLID[selfIndex],
imports.begin() + selfReceiveOffset);
selfReceiveOffset += numExportPacketsPerLID[selfIndex];
++selfIndex;
}
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,slow) done" << endl;
*out_ << os.str ();
}
}
}
template <class Packet>
void Distributor::
doReversePostsAndWaits (const ArrayView<const Packet>& exports,
size_t numPackets,
const ArrayView<Packet>& imports)
{
using Teuchos::as;
// doReversePosts() takes exports and imports as ArrayRCPs,
// requiring that the memory locations are persisting. However,
// they need only persist within the scope of that routine, so it
// is safe for us to use nonpersisting references in this case.
// mfh 04 Apr 2012: For some reason, calling arcp<const Packet>
// for Packet=std::complex<T> (e.g., T=float) fails to compile
// with some versions of GCC. The issue only arises with the
// exports array. This is why we construct a separate nonowning
// ArrayRCP.
typedef typename ArrayRCP<const Packet>::size_type size_type;
ArrayRCP<const Packet> exportsArcp (exports.getRawPtr(), as<size_type> (0),
exports.size(), false);
// mfh 04 Apr 2012: This is the offending code. This statement
// would normally be in place of "exportsArcp" in the
// doReversePosts() call below.
//arcp<const Packet> (exports.getRawPtr(), 0, exports.size(), false)
doReversePosts (exportsArcp,
numPackets,
arcp<Packet> (imports.getRawPtr (), 0, imports.size (), false));
doReverseWaits ();
lastRoundBytesSend_ = exports.size() * sizeof(Packet);
lastRoundBytesRecv_ = imports.size() * sizeof(Packet);
}
template <class Packet>
void Distributor::
doReversePostsAndWaits (const ArrayView<const Packet>& exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const ArrayView<Packet> &imports,
const ArrayView<size_t> &numImportPacketsPerLID)
{
using Teuchos::as;
using Teuchos::arcp;
using Teuchos::ArrayRCP;
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::runtime_error, "Tpetra::Distributor::"
"doReversePostsAndWaits(4 args): There are " << requests_.size ()
<< " outstanding nonblocking messages pending. It is incorrect to call "
"this method with posts outstanding.");
// doReversePosts() accepts the exports and imports arrays as
// ArrayRCPs, requiring that the memory location is persisting (as
// is necessary for nonblocking receives). However, it need only
// persist until doReverseWaits() completes, so it is safe for us
// to use a nonpersisting reference in this case. The use of a
// nonpersisting reference is purely a performance optimization.
// mfh 02 Apr 2012: For some reason, calling arcp<const Packet>
// for Packet=std::complex<double> fails to compile with some
// versions of GCC. The issue only arises with the exports array.
// This is why we construct a separate nonowning ArrayRCP.
typedef typename ArrayRCP<const Packet>::size_type size_type;
ArrayRCP<const Packet> exportsArcp (exports.getRawPtr (), as<size_type> (0),
exports.size (), false);
doReversePosts (exportsArcp,
numExportPacketsPerLID,
arcp<Packet> (imports.getRawPtr (), 0, imports.size (), false),
numImportPacketsPerLID);
doReverseWaits ();
lastRoundBytesSend_ = exports.size() * sizeof(Packet);
lastRoundBytesRecv_ = imports.size() * sizeof(Packet);
}
template <class Packet>
void Distributor::
doReversePosts (const ArrayRCP<const Packet>& exports,
size_t numPackets,
const ArrayRCP<Packet>& imports)
{
// FIXME (mfh 29 Mar 2012) WHY?
TEUCHOS_TEST_FOR_EXCEPTION(
! indicesTo_.empty (), std::runtime_error,
"Tpetra::Distributor::doReversePosts(3 args): Can only do reverse "
"communication when original data are blocked by process.");
if (reverseDistributor_.is_null ()) {
createReverseDistributor ();
}
reverseDistributor_->doPosts (exports, numPackets, imports);
}
template <class Packet>
void Distributor::
doReversePosts (const ArrayRCP<const Packet>& exports,
const ArrayView<size_t>& numExportPacketsPerLID,
const ArrayRCP<Packet>& imports,
const ArrayView<size_t>& numImportPacketsPerLID)
{
// FIXME (mfh 29 Mar 2012) WHY?
TEUCHOS_TEST_FOR_EXCEPTION(
! indicesTo_.empty (), std::runtime_error,
"Tpetra::Distributor::doReversePosts(3 args): Can only do reverse "
"communication when original data are blocked by process.");
if (reverseDistributor_.is_null ()) {
createReverseDistributor ();
}
reverseDistributor_->doPosts (exports, numExportPacketsPerLID,
imports, numImportPacketsPerLID);
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doPostsAndWaits (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports)
{
// If the MPI library doesn't support RDMA for communication
// directly to or from the GPU's memory, we must transfer exports
// to the host, do the communication, then transfer imports back
// to the GPU.
//
// We need to do this here instead of doPosts() because the copy
// back to the GPU must occur after the waits.
typedef Kokkos::View<const Packet*, Layout, Device, Mem> exports_view;
typedef Kokkos::View<Packet*, Layout, Device, Mem> imports_view;
const bool can_access_from_host =
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace< Kokkos::HostSpace,
typename exports_view::memory_space >::value;
if (! enable_cuda_rdma_ && ! can_access_from_host) {
typename exports_view::HostMirror host_exports =
Kokkos::create_mirror_view (exports);
typename imports_view::HostMirror host_imports =
Kokkos::create_mirror_view (imports);
Kokkos::deep_copy (host_exports, exports);
doPostsAndWaits (Kokkos::Compat::create_const_view (host_exports),
numPackets,
host_imports);
Kokkos::deep_copy (imports, host_imports);
return;
}
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::runtime_error, "Tpetra::Distributor::"
"doPostsAndWaits(3 args): There are " << requests_.size () <<
" outstanding nonblocking messages pending. It is incorrect to call "
"this method with posts outstanding.");
doPosts (exports, numPackets, imports);
doWaits ();
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doPostsAndWaits (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID)
{
// If MPI library doesn't support RDMA for communication directly
// to/from GPU, transfer exports to the host, do the communication, then
// transfer imports back to the GPU
//
// We need to do this here instead of doPosts() because the copy back
// to the GPU must occur after the waits.
typedef Kokkos::View<const Packet*, Layout, Device, Mem> exports_view;
typedef Kokkos::View<Packet*, Layout, Device, Mem> imports_view;
if (!enable_cuda_rdma_ && !exports_view::is_hostspace) {
typename exports_view::HostMirror host_exports =
Kokkos::create_mirror_view(exports);
typename imports_view::HostMirror host_imports =
Kokkos::create_mirror_view(imports);
Kokkos::deep_copy (host_exports, exports);
doPostsAndWaits(Kokkos::Compat::create_const_view(host_exports),
numExportPacketsPerLID,
host_imports,
numImportPacketsPerLID);
Kokkos::deep_copy (imports, host_imports);
return;
}
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::runtime_error,
"Tpetra::Distributor::doPostsAndWaits(4 args): There are "
<< requests_.size () << " outstanding nonblocking messages pending. "
"It is incorrect to call this method with posts outstanding.");
doPosts (exports, numExportPacketsPerLID, imports, numImportPacketsPerLID);
doWaits ();
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doPosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports)
{
using Teuchos::Array;
using Teuchos::as;
using Teuchos::FancyOStream;
using Teuchos::includesVerbLevel;
using Teuchos::ireceive;
using Teuchos::isend;
using Teuchos::OSTab;
using Teuchos::readySend;
using Teuchos::send;
using Teuchos::ssend;
using Teuchos::TypeNameTraits;
using Teuchos::typeName;
using std::endl;
using Kokkos::Compat::create_const_view;
using Kokkos::Compat::create_view;
using Kokkos::Compat::subview_offset;
using Kokkos::Compat::deep_copy_offset;
typedef Array<size_t>::size_type size_type;
typedef Kokkos::View<const Packet*, Layout, Device, Mem> exports_view_type;
typedef Kokkos::View<Packet*, Layout, Device, Mem> imports_view_type;
Teuchos::OSTab tab (out_);
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMon (*timer_doPosts3_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// Run-time configurable parameters that come from the input
// ParameterList set by setParameterList().
const Details::EDistributorSendType sendType = sendType_;
const bool doBarrier = barrierBetween_;
// #ifdef HAVE_TEUCHOS_DEBUG
// // Prepare for verbose output, if applicable.
// Teuchos::EVerbosityLevel verbLevel = this->getVerbLevel ();
// (void) verbLevel; // Silence "unused variable" compiler warning.
// RCP<FancyOStream> out = this->getOStream ();
// // const bool doPrint = out.get () && (comm_->getRank () == 0) &&
// // includesVerbLevel (verbLevel, Teuchos::VERB_EXTREME, true);
// const bool doPrint = out.get () && (comm_->getRank () == 0);
// if (doPrint) {
// // Only need one process to print out parameters.
// *out << "Distributor::doPosts (3 args)" << endl;
// }
// // Add one tab level. We declare this outside the doPrint scopes
// // so that the tab persists until the end of this method.
// OSTab tab = this->getOSTab ();
// if (doPrint) {
// *out << "Parameters:" << endl;
// {
// OSTab tab2 (out);
// *out << "sendType: " << DistributorSendTypeEnumToString (sendType)
// << endl << "barrierBetween: " << doBarrier << endl;
// }
// }
// #endif // HAVE_TEUCHOS_DEBUG
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_RSEND && ! doBarrier, std::logic_error,
"Tpetra::Distributor::doPosts(3 args): Ready-send version requires a "
"barrier between posting receives and posting ready sends. This should "
"have been checked before. "
"Please report this bug to the Tpetra developers.");
const int myImageID = comm_->getRank ();
size_t selfReceiveOffset = 0;
// Each message has the same number of packets.
const size_t totalNumImportPackets = totalReceiveLength_ * numPackets;
TEUCHOS_TEST_FOR_EXCEPTION(
static_cast<size_t> (imports.dimension_0 ()) < totalNumImportPackets,
std::runtime_error, "Tpetra::Distributor::doPosts(3 args): The 'imports' "
"array must have enough entries to hold the expected number of import "
"packets. imports.dimension_0() = " << imports.dimension_0 () << " < "
"totalNumImportPackets = " << totalNumImportPackets << ".");
// MPI tag for nonblocking receives and blocking sends in this
// method. Some processes might take the "fast" path
// (indicesTo_.empty()) and others might take the "slow" path for
// the same doPosts() call, so the path tag must be the same for
// both.
const int pathTag = 0;
const int tag = this->getTag (pathTag);
if (debug_) {
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::logic_error, "Tpetra::Distributor::"
"doPosts(3 args): Process " << myImageID << ": requests_.size() = "
<< requests_.size () << " != 0.");
std::ostringstream os;
os << myImageID << ": doPosts(3,"
<< (indicesTo_.empty () ? "fast" : "slow") << ")" << endl;
*out_ << os.str ();
}
// Distributor uses requests_.size() as the number of outstanding
// nonblocking message requests, so we resize to zero to maintain
// this invariant.
//
// numReceives_ does _not_ include the self message, if there is
// one. Here, we do actually send a message to ourselves, so we
// include any self message in the "actual" number of receives to
// post.
//
// NOTE (mfh 19 Mar 2012): Epetra_MpiDistributor::DoPosts()
// doesn't (re)allocate its array of requests. That happens in
// CreateFromSends(), ComputeRecvs_(), DoReversePosts() (on
// demand), or Resize_().
const size_type actualNumReceives = as<size_type> (numReceives_) +
as<size_type> (selfMessage_ ? 1 : 0);
requests_.resize (0);
// Post the nonblocking receives. It's common MPI wisdom to post
// receives before sends. In MPI terms, this means favoring
// adding to the "posted queue" (of receive requests) over adding
// to the "unexpected queue" (of arrived messages not yet matched
// with a receive).
{
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonRecvs (*timer_doPosts3_recvs_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
size_t curBufferOffset = 0;
for (size_type i = 0; i < actualNumReceives; ++i) {
if (imagesFrom_[i] != myImageID) {
// If my process is receiving these packet(s) from another
// process (not a self-receive):
//
// 1. Set up the persisting view (recvBuf) of the imports
// array, given the offset and size (total number of
// packets from process imagesFrom_[i]).
// 2. Start the Irecv and save the resulting request.
imports_view_type recvBuf =
subview_offset (imports, curBufferOffset, lengthsFrom_[i]*numPackets);
requests_.push_back (ireceive<int> (recvBuf, imagesFrom_[i],
tag, *comm_));
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,"
<< (indicesTo_.empty () ? "fast" : "slow") << "): "
<< "Posted irecv from Proc " << imagesFrom_[i] << " with "
"specified tag " << tag << endl;
*out_ << os.str ();
}
}
else { // Receiving from myself
selfReceiveOffset = curBufferOffset; // Remember the self-recv offset
}
curBufferOffset += lengthsFrom_[i]*numPackets;
}
}
if (doBarrier) {
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonBarrier (*timer_doPosts3_barrier_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// If we are using ready sends (MPI_Rsend) below, we need to do
// a barrier before we post the ready sends. This is because a
// ready send requires that its matching receive has already
// been posted before the send has been posted. The only way to
// guarantee that in this case is to use a barrier.
comm_->barrier ();
}
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonSends (*timer_doPosts3_sends_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// setup scan through imagesTo_ list starting with higher numbered images
// (should help balance message traffic)
//
// FIXME (mfh 20 Feb 2013) Why haven't we precomputed this?
// It doesn't depend on the input at all.
size_t numBlocks = numSends_ + selfMessage_;
size_t imageIndex = 0;
while ((imageIndex < numBlocks) && (imagesTo_[imageIndex] < myImageID)) {
++imageIndex;
}
if (imageIndex == numBlocks) {
imageIndex = 0;
}
size_t selfNum = 0;
size_t selfIndex = 0;
if (indicesTo_.empty()) {
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,fast): posting sends" << endl;
*out_ << os.str ();
}
// Data are already blocked (laid out) by process, so we don't
// need a separate send buffer (besides the exports array).
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID) {
exports_view_type tmpSend = subview_offset(
exports, startsTo_[p]*numPackets, lengthsTo_[p]*numPackets);
if (sendType == Details::DISTRIBUTOR_SEND) {
send<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
exports_view_type tmpSendBuf =
subview_offset (exports, startsTo_[p] * numPackets,
lengthsTo_[p] * numPackets);
requests_.push_back (isend<int> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
} else {
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Tpetra::Distributor::doPosts(3 args): "
"Invalid send type. We should never get here. "
"Please report this bug to the Tpetra developers.");
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,fast): "
<< "Posted send to Proc " << imagesTo_[i]
<< " w/ specified tag " << tag << endl;
*out_ << os.str ();
}
}
else { // "Sending" the message to myself
selfNum = p;
}
}
if (selfMessage_) {
// This is how we "send a message to ourself": we copy from
// the export buffer to the import buffer. That saves
// Teuchos::Comm implementations other than MpiComm (in
// particular, SerialComm) the trouble of implementing self
// messages correctly. (To do this right, SerialComm would
// need internal buffer space for messages, keyed on the
// message's tag.)
deep_copy_offset(imports, exports, selfReceiveOffset,
startsTo_[selfNum]*numPackets,
lengthsTo_[selfNum]*numPackets);
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,fast) done" << endl;
*out_ << os.str ();
}
}
else { // data are not blocked by image, use send buffer
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,slow): posting sends" << endl;
*out_ << os.str ();
}
// FIXME (mfh 05 Mar 2013) This is broken for Isend (nonblocking
// sends), because the buffer is only long enough for one send.
Kokkos::View<Packet*,Layout,Device,Mem> sendArray =
create_view<Packet,Layout,Device,Mem> ("sendArray",
maxSendLength_ * numPackets);
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_ISEND, std::logic_error,
"Tpetra::Distributor::doPosts(3 args): The \"send buffer\" code path "
"doesn't currently work with nonblocking sends.");
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID) {
size_t sendArrayOffset = 0;
size_t j = startsTo_[p];
for (size_t k = 0; k < lengthsTo_[p]; ++k, ++j) {
deep_copy_offset(sendArray, exports, sendArrayOffset,
indicesTo_[j]*numPackets, numPackets);
sendArrayOffset += numPackets;
}
Kokkos::View<Packet*, Layout, Device, Mem> tmpSend =
subview_offset(sendArray, size_t(0), lengthsTo_[p]*numPackets);
if (sendType == Details::DISTRIBUTOR_SEND) {
send<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
exports_view_type tmpSendBuf =
subview_offset (sendArray, size_t(0), lengthsTo_[p] * numPackets);
requests_.push_back (isend<int> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else {
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Tpetra::Distributor::doPosts(3 args): "
"Invalid send type. We should never get here. "
"Please report this bug to the Tpetra developers.");
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,slow): "
<< "Posted send to Proc " << imagesTo_[i]
<< " w/ specified tag " << tag << endl;
*out_ << os.str ();
}
}
else { // "Sending" the message to myself
selfNum = p;
selfIndex = startsTo_[p];
}
}
if (selfMessage_) {
for (size_t k = 0; k < lengthsTo_[selfNum]; ++k) {
deep_copy_offset(imports, exports, selfReceiveOffset,
indicesTo_[selfIndex]*numPackets, numPackets);
++selfIndex;
selfReceiveOffset += numPackets;
}
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(3,slow) done" << endl;
*out_ << os.str ();
}
}
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doPosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID)
{
using Teuchos::Array;
using Teuchos::as;
using Teuchos::ireceive;
using Teuchos::isend;
using Teuchos::readySend;
using Teuchos::send;
using Teuchos::ssend;
using Teuchos::TypeNameTraits;
#ifdef HAVE_TEUCHOS_DEBUG
using Teuchos::OSTab;
#endif // HAVE_TEUCHOS_DEBUG
using std::endl;
using Kokkos::Compat::create_const_view;
using Kokkos::Compat::create_view;
using Kokkos::Compat::subview_offset;
using Kokkos::Compat::deep_copy_offset;
typedef Array<size_t>::size_type size_type;
typedef Kokkos::View<const Packet*, Layout, Device, Mem> exports_view_type;
typedef Kokkos::View<Packet*, Layout, Device, Mem> imports_view_type;
Teuchos::OSTab tab (out_);
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMon (*timer_doPosts4_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// Run-time configurable parameters that come from the input
// ParameterList set by setParameterList().
const Details::EDistributorSendType sendType = sendType_;
const bool doBarrier = barrierBetween_;
// #ifdef HAVE_TEUCHOS_DEBUG
// // Prepare for verbose output, if applicable.
// Teuchos::EVerbosityLevel verbLevel = this->getVerbLevel ();
// RCP<Teuchos::FancyOStream> out = this->getOStream ();
// const bool doPrint = out.get () && (comm_->getRank () == 0) &&
// includesVerbLevel (verbLevel, Teuchos::VERB_EXTREME, true);
// if (doPrint) {
// // Only need one process to print out parameters.
// *out << "Distributor::doPosts (4 args)" << endl;
// }
// // Add one tab level. We declare this outside the doPrint scopes
// // so that the tab persists until the end of this method.
// Teuchos::OSTab tab = this->getOSTab ();
// if (doPrint) {
// *out << "Parameters:" << endl;
// {
// OSTab tab2 (out);
// *out << "sendType: " << DistributorSendTypeEnumToString (sendType)
// << endl << "barrierBetween: " << doBarrier << endl;
// }
// }
// #endif // HAVE_TEUCHOS_DEBUG
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_RSEND && ! doBarrier,
std::logic_error, "Tpetra::Distributor::doPosts(4 args): Ready-send "
"version requires a barrier between posting receives and posting ready "
"sends. This should have been checked before. "
"Please report this bug to the Tpetra developers.");
const int myImageID = comm_->getRank ();
size_t selfReceiveOffset = 0;
#ifdef HAVE_TEUCHOS_DEBUG
// Different messages may have different numbers of packets.
size_t totalNumImportPackets = 0;
for (size_type ii = 0; ii < numImportPacketsPerLID.size (); ++ii) {
totalNumImportPackets += numImportPacketsPerLID[ii];
}
TEUCHOS_TEST_FOR_EXCEPTION(
imports.dimension_0 () < totalNumImportPackets, std::runtime_error,
"Tpetra::Distributor::doPosts(4 args): The 'imports' array must have "
"enough entries to hold the expected number of import packets. "
"imports.dimension_0() = " << imports.dimension_0 () << " < "
"totalNumImportPackets = " << totalNumImportPackets << ".");
#endif // HAVE_TEUCHOS_DEBUG
// MPI tag for nonblocking receives and blocking sends in this
// method. Some processes might take the "fast" path
// (indicesTo_.empty()) and others might take the "slow" path for
// the same doPosts() call, so the path tag must be the same for
// both.
const int pathTag = 1;
const int tag = this->getTag (pathTag);
if (debug_) {
TEUCHOS_TEST_FOR_EXCEPTION(
requests_.size () != 0, std::logic_error, "Tpetra::Distributor::"
"doPosts(4 args): Process " << myImageID << ": requests_.size () = "
<< requests_.size () << " != 0.");
std::ostringstream os;
os << myImageID << ": doPosts(4,"
<< (indicesTo_.empty () ? "fast" : "slow") << ")" << endl;
*out_ << os.str ();
}
// Distributor uses requests_.size() as the number of outstanding
// nonblocking message requests, so we resize to zero to maintain
// this invariant.
//
// numReceives_ does _not_ include the self message, if there is
// one. Here, we do actually send a message to ourselves, so we
// include any self message in the "actual" number of receives to
// post.
//
// NOTE (mfh 19 Mar 2012): Epetra_MpiDistributor::DoPosts()
// doesn't (re)allocate its array of requests. That happens in
// CreateFromSends(), ComputeRecvs_(), DoReversePosts() (on
// demand), or Resize_().
const size_type actualNumReceives = as<size_type> (numReceives_) +
as<size_type> (selfMessage_ ? 1 : 0);
requests_.resize (0);
// Post the nonblocking receives. It's common MPI wisdom to post
// receives before sends. In MPI terms, this means favoring
// adding to the "posted queue" (of receive requests) over adding
// to the "unexpected queue" (of arrived messages not yet matched
// with a receive).
{
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonRecvs (*timer_doPosts4_recvs_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
size_t curBufferOffset = 0;
size_t curLIDoffset = 0;
for (size_type i = 0; i < actualNumReceives; ++i) {
size_t totalPacketsFrom_i = 0;
for (size_t j = 0; j < lengthsFrom_[i]; ++j) {
totalPacketsFrom_i += numImportPacketsPerLID[curLIDoffset+j];
}
curLIDoffset += lengthsFrom_[i];
if (imagesFrom_[i] != myImageID && totalPacketsFrom_i) {
// If my process is receiving these packet(s) from another
// process (not a self-receive), and if there is at least
// one packet to receive:
//
// 1. Set up the persisting view (recvBuf) into the imports
// array, given the offset and size (total number of
// packets from process imagesFrom_[i]).
// 2. Start the Irecv and save the resulting request.
imports_view_type recvBuf =
subview_offset (imports, curBufferOffset, totalPacketsFrom_i);
requests_.push_back (ireceive<int> (recvBuf, imagesFrom_[i],
tag, *comm_));
}
else { // Receiving these packet(s) from myself
selfReceiveOffset = curBufferOffset; // Remember the offset
}
curBufferOffset += totalPacketsFrom_i;
}
}
if (doBarrier) {
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonBarrier (*timer_doPosts4_barrier_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// If we are using ready sends (MPI_Rsend) below, we need to do
// a barrier before we post the ready sends. This is because a
// ready send requires that its matching receive has already
// been posted before the send has been posted. The only way to
// guarantee that in this case is to use a barrier.
comm_->barrier ();
}
#ifdef TPETRA_DISTRIBUTOR_TIMERS
Teuchos::TimeMonitor timeMonSends (*timer_doPosts4_sends_);
#endif // TPETRA_DISTRIBUTOR_TIMERS
// setup arrays containing starting-offsets into exports for each send,
// and num-packets-to-send for each send.
Array<size_t> sendPacketOffsets(numSends_,0), packetsPerSend(numSends_,0);
size_t maxNumPackets = 0;
size_t curPKToffset = 0;
for (size_t pp=0; pp<numSends_; ++pp) {
sendPacketOffsets[pp] = curPKToffset;
size_t numPackets = 0;
for (size_t j=startsTo_[pp]; j<startsTo_[pp]+lengthsTo_[pp]; ++j) {
numPackets += numExportPacketsPerLID[j];
}
if (numPackets > maxNumPackets) maxNumPackets = numPackets;
packetsPerSend[pp] = numPackets;
curPKToffset += numPackets;
}
// setup scan through imagesTo_ list starting with higher numbered images
// (should help balance message traffic)
size_t numBlocks = numSends_+ selfMessage_;
size_t imageIndex = 0;
while ((imageIndex < numBlocks) && (imagesTo_[imageIndex] < myImageID)) {
++imageIndex;
}
if (imageIndex == numBlocks) {
imageIndex = 0;
}
size_t selfNum = 0;
size_t selfIndex = 0;
if (indicesTo_.empty()) {
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,fast): posting sends" << endl;
*out_ << os.str ();
}
// Data are already blocked (laid out) by process, so we don't
// need a separate send buffer (besides the exports array).
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID && packetsPerSend[p] > 0) {
exports_view_type tmpSend =
subview_offset(exports, sendPacketOffsets[p], packetsPerSend[p]);
if (sendType == Details::DISTRIBUTOR_SEND) { // the default, so put it first
send<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
exports_view_type tmpSendBuf =
subview_offset (exports, sendPacketOffsets[p], packetsPerSend[p]);
requests_.push_back (isend<int> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else {
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Tpetra::Distributor::doPosts(4 args): "
"Invalid send type. We should never get here. "
"Please report this bug to the Tpetra developers.");
}
}
else { // "Sending" the message to myself
selfNum = p;
}
}
if (selfMessage_) {
deep_copy_offset(imports, exports, selfReceiveOffset,
sendPacketOffsets[selfNum], packetsPerSend[selfNum]);
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,fast) done" << endl;
*out_ << os.str ();
}
}
else { // data are not blocked by image, use send buffer
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,slow): posting sends" << endl;
*out_ << os.str ();
}
// FIXME (mfh 05 Mar 2013) This may be broken for Isend.
Kokkos::View<Packet*,Layout,Device,Mem> sendArray =
create_view<Packet,Layout,Device,Mem>("sendArray", maxNumPackets); // send buffer
TEUCHOS_TEST_FOR_EXCEPTION(
sendType == Details::DISTRIBUTOR_ISEND, std::logic_error,
"Tpetra::Distributor::doPosts(3 args): The \"send buffer\" code path "
"may not necessarily work with nonblocking sends.");
Array<size_t> indicesOffsets (numExportPacketsPerLID.size(), 0);
size_t ioffset = 0;
for (int j=0; j<numExportPacketsPerLID.size(); ++j) {
indicesOffsets[j] = ioffset;
ioffset += numExportPacketsPerLID[j];
}
for (size_t i = 0; i < numBlocks; ++i) {
size_t p = i + imageIndex;
if (p > (numBlocks - 1)) {
p -= numBlocks;
}
if (imagesTo_[p] != myImageID) {
size_t sendArrayOffset = 0;
size_t j = startsTo_[p];
size_t numPacketsTo_p = 0;
for (size_t k = 0; k < lengthsTo_[p]; ++k, ++j) {
deep_copy_offset(sendArray, exports, sendArrayOffset,
indicesOffsets[j], numExportPacketsPerLID[j]);
sendArrayOffset += numExportPacketsPerLID[j];
}
if (numPacketsTo_p > 0) {
Kokkos::View<Packet*, Layout, Device, Mem> tmpSend =
subview_offset(sendArray, size_t(0), numPacketsTo_p);
if (sendType == Details::DISTRIBUTOR_RSEND) {
readySend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else if (sendType == Details::DISTRIBUTOR_ISEND) {
exports_view_type tmpSendBuf =
subview_offset (sendArray, size_t(0), numPacketsTo_p);
requests_.push_back (isend<int> (tmpSendBuf, imagesTo_[p],
tag, *comm_));
}
else if (sendType == Details::DISTRIBUTOR_SSEND) {
ssend<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
else { // if (sendType == Details::DISTRIBUTOR_SSEND)
send<int> (tmpSend,
as<int> (tmpSend.size ()),
imagesTo_[p], tag, *comm_);
}
}
}
else { // "Sending" the message to myself
selfNum = p;
selfIndex = startsTo_[p];
}
}
if (selfMessage_) {
for (size_t k = 0; k < lengthsTo_[selfNum]; ++k) {
deep_copy_offset(imports, exports, selfReceiveOffset,
indicesOffsets[selfIndex],
numExportPacketsPerLID[selfIndex]);
selfReceiveOffset += numExportPacketsPerLID[selfIndex];
++selfIndex;
}
}
if (debug_) {
std::ostringstream os;
os << myImageID << ": doPosts(4,slow) done" << endl;
*out_ << os.str ();
}
}
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doReversePostsAndWaits (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports)
{
// If MPI library doesn't support RDMA for communication directly
// to/from GPU, transfer exports to the host, do the communication, then
// transfer imports back to the GPU
//
// We need to do this here instead of doPosts() because the copy back
// to the GPU must occur after the waits.
typedef Kokkos::View<const Packet*, Layout, Device, Mem> exports_view;
typedef Kokkos::View<Packet*, Layout, Device, Mem> imports_view;
if (!enable_cuda_rdma_ && !exports_view::is_hostspace) {
typename exports_view::HostMirror host_exports =
Kokkos::create_mirror_view(exports);
typename imports_view::HostMirror host_imports =
Kokkos::create_mirror_view(imports);
Kokkos::deep_copy (host_exports, exports);
doPostsAndWaits(Kokkos::Compat::create_const_view(host_exports),
numPackets,
host_imports);
Kokkos::deep_copy (imports, host_imports);
return;
}
doReversePosts (exports, numPackets, imports);
doReverseWaits ();
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doReversePostsAndWaits (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID)
{
// If MPI library doesn't support RDMA for communication directly
// to/from GPU, transfer exports to the host, do the communication, then
// transfer imports back to the GPU
//
// We need to do this here instead of doPosts() because the copy back
// to the GPU must occur after the waits.
typedef Kokkos::View<const Packet*, Layout, Device, Mem> exports_view;
typedef Kokkos::View<Packet*, Layout, Device, Mem> imports_view;
if (!enable_cuda_rdma_ && !exports_view::is_hostspace) {
typename exports_view::HostMirror host_exports =
Kokkos::create_mirror_view(exports);
typename imports_view::HostMirror host_imports =
Kokkos::create_mirror_view(imports);
Kokkos::deep_copy (host_exports, exports);
doPostsAndWaits(Kokkos::Compat::create_const_view(host_exports),
numExportPacketsPerLID,
host_imports,
numImportPacketsPerLID);
Kokkos::deep_copy (imports, host_imports);
return;
}
TEUCHOS_TEST_FOR_EXCEPTION(requests_.size() != 0, std::runtime_error,
"Tpetra::Distributor::doReversePostsAndWaits(4 args): There are "
<< requests_.size() << " outstanding nonblocking messages pending. It "
"is incorrect to call this method with posts outstanding.");
doReversePosts (exports, numExportPacketsPerLID, imports,
numImportPacketsPerLID);
doReverseWaits ();
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doReversePosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
size_t numPackets,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports)
{
// FIXME (mfh 29 Mar 2012) WHY?
TEUCHOS_TEST_FOR_EXCEPTION(
! indicesTo_.empty (), std::runtime_error,
"Tpetra::Distributor::doReversePosts(3 args): Can only do "
"reverse communication when original data are blocked by process.");
if (reverseDistributor_.is_null ()) {
createReverseDistributor ();
}
reverseDistributor_->doPosts (exports, numPackets, imports);
}
template <class Packet, class Layout, class Device, class Mem>
void Distributor::
doReversePosts (const Kokkos::View<const Packet*, Layout, Device, Mem> &exports,
const ArrayView<size_t> &numExportPacketsPerLID,
const Kokkos::View<Packet*, Layout, Device, Mem> &imports,
const ArrayView<size_t> &numImportPacketsPerLID)
{
// FIXME (mfh 29 Mar 2012) WHY?
TEUCHOS_TEST_FOR_EXCEPTION(
! indicesTo_.empty (), std::runtime_error,
"Tpetra::Distributor::doReversePosts(3 args): Can only do "
"reverse communication when original data are blocked by process.");
if (reverseDistributor_.is_null ()) {
createReverseDistributor ();
}
reverseDistributor_->doPosts (exports, numExportPacketsPerLID,
imports, numImportPacketsPerLID);
}
template <class OrdinalType>
void Distributor::
computeSends (const ArrayView<const OrdinalType> & importIDs,
const ArrayView<const int> & importNodeIDs,
Array<OrdinalType> & exportIDs,
Array<int> & exportNodeIDs)
{
// NOTE (mfh 19 Apr 2012): There was a note on this code saying:
// "assumes that size_t >= Ordinal". The code certainly does
// assume that sizeof(size_t) >= sizeof(OrdinalType) as well as
// sizeof(size_t) >= sizeof(int). This is because it casts the
// OrdinalType elements of importIDs (along with their
// corresponding process IDs, as int) to size_t, and does a
// doPostsAndWaits<size_t>() to send the packed data.
using std::endl;
typedef typename ArrayView<const OrdinalType>::size_type size_type;
Teuchos::OSTab tab (out_);
const int myRank = comm_->getRank ();
if (debug_) {
std::ostringstream os;
os << myRank << ": computeSends" << endl;
*out_ << os.str ();
}
TEUCHOS_TEST_FOR_EXCEPTION(
importIDs.size () != importNodeIDs.size (), std::invalid_argument,
"Tpetra::Distributor::computeSends: On Process " << myRank << ": "
"importNodeIDs.size() = " << importNodeIDs.size ()
<< " != importIDs.size() = " << importIDs.size () << ".");
const size_type numImports = importNodeIDs.size ();
Array<size_t> importObjs (2*numImports);
// Pack pairs (importIDs[i], my process ID) to send into importObjs.
for (size_type i = 0; i < numImports; ++i) {
importObjs[2*i] = static_cast<size_t> (importIDs[i]);
importObjs[2*i+1] = static_cast<size_t> (myRank);
}
//
// Use a temporary Distributor to send the (importIDs[i], myRank)
// pairs to importNodeIDs[i].
//
Distributor tempPlan (comm_, out_);
if (debug_) {
std::ostringstream os;
os << myRank << ": computeSends: tempPlan.createFromSends" << endl;
*out_ << os.str ();
}
// mfh 20 Mar 2014: An extra-cautious cast from unsigned to
// signed, in order to forestall any possible causes for Bug 6069.
const size_t numExportsAsSizeT = tempPlan.createFromSends (importNodeIDs);
const size_type numExports = static_cast<size_type> (numExportsAsSizeT);
TEUCHOS_TEST_FOR_EXCEPTION(
numExports < 0, std::logic_error, "Tpetra::Distributor::computeSends: "
"tempPlan.createFromSends() returned numExports = " << numExportsAsSizeT
<< " as a size_t, which overflows to " << numExports << " when cast to "
<< Teuchos::TypeNameTraits<size_type>::name () << ". "
"Please report this bug to the Tpetra developers.");
TEUCHOS_TEST_FOR_EXCEPTION(
static_cast<size_type> (tempPlan.getTotalReceiveLength ()) != numExports,
std::logic_error, "Tpetra::Distributor::computeSends: tempPlan.getTotal"
"ReceiveLength() = " << tempPlan.getTotalReceiveLength () << " != num"
"Exports = " << numExports << ". Please report this bug to the "
"Tpetra developers.");
if (numExports > 0) {
exportIDs.resize (numExports);
exportNodeIDs.resize (numExports);
}
// exportObjs: Packed receive buffer. (exportObjs[2*i],
// exportObjs[2*i+1]) will give the (GID, PID) pair for export i,
// after tempPlan.doPostsAndWaits(...) finishes below.
//
// FIXME (mfh 19 Mar 2014) This only works if OrdinalType fits in
// size_t. This issue might come up, for example, on a 32-bit
// machine using 64-bit global indices. I will add a check here
// for that case.
TEUCHOS_TEST_FOR_EXCEPTION(
sizeof (size_t) < sizeof (OrdinalType), std::logic_error,
"Tpetra::Distributor::computeSends: sizeof(size_t) = " << sizeof(size_t)
<< " < sizeof(" << Teuchos::TypeNameTraits<OrdinalType>::name () << ") = "
<< sizeof (OrdinalType) << ". This violates an assumption of the "
"method. It's not hard to work around (just use Array<OrdinalType> as "
"the export buffer, not Array<size_t>), but we haven't done that yet. "
"Please report this bug to the Tpetra developers.");
TEUCHOS_TEST_FOR_EXCEPTION(
tempPlan.getTotalReceiveLength () < static_cast<size_t> (numExports),
std::logic_error,
"Tpetra::Distributor::computeSends: tempPlan.getTotalReceiveLength() = "
<< tempPlan.getTotalReceiveLength() << " < numExports = " << numExports
<< ". Please report this bug to the Tpetra developers.");
Array<size_t> exportObjs (tempPlan.getTotalReceiveLength () * 2);
if (debug_) {
std::ostringstream os;
os << myRank << ": computeSends: tempPlan.doPostsAndWaits" << endl;
*out_ << os.str ();
}
tempPlan.doPostsAndWaits<size_t> (importObjs (), 2, exportObjs ());
// Unpack received (GID, PID) pairs into exportIDs resp. exportNodeIDs.
for (size_type i = 0; i < numExports; ++i) {
exportIDs[i] = static_cast<OrdinalType> (exportObjs[2*i]);
exportNodeIDs[i] = static_cast<int> (exportObjs[2*i+1]);
}
if (debug_) {
std::ostringstream os;
os << myRank << ": computeSends done" << endl;
*out_ << os.str ();
}
}
template <class OrdinalType>
void Distributor::
createFromRecvs (const ArrayView<const OrdinalType> &remoteIDs,
const ArrayView<const int> &remoteImageIDs,
Array<OrdinalType> &exportGIDs,
Array<int> &exportNodeIDs)
{
using std::endl;
Teuchos::OSTab tab (out_);
const int myRank = comm_->getRank();
if (debug_) {
*out_ << myRank << ": createFromRecvs" << endl;
}
#ifdef HAVE_TPETRA_DEBUG
using Teuchos::outArg;
using Teuchos::reduceAll;
// In debug mode, first test locally, then do an all-reduce to
// make sure that all processes passed.
const int errProc =
(remoteIDs.size () != remoteImageIDs.size ()) ? myRank : -1;
int maxErrProc = -1;
reduceAll<int, int> (*comm_, Teuchos::REDUCE_MAX, errProc, outArg (maxErrProc));
TEUCHOS_TEST_FOR_EXCEPTION(maxErrProc != -1, std::runtime_error,
Teuchos::typeName (*this) << "::createFromRecvs(): lists of remote IDs "
"and remote process IDs must have the same size on all participating "
"processes. Maximum process ID with error: " << maxErrProc << ".");
#else // NOT HAVE_TPETRA_DEBUG
// In non-debug mode, just test locally.
TEUCHOS_TEST_FOR_EXCEPTION(
remoteIDs.size () != remoteImageIDs.size (), std::invalid_argument,
Teuchos::typeName (*this) << "::createFromRecvs<" <<
Teuchos::TypeNameTraits<OrdinalType>::name () << ">(): On Process " <<
myRank << ": remoteIDs.size() = " << remoteIDs.size () << " != "
"remoteImageIDs.size() = " << remoteImageIDs.size () << ".");
#endif // HAVE_TPETRA_DEBUG
computeSends (remoteIDs, remoteImageIDs, exportGIDs, exportNodeIDs);
const size_t numProcsSendingToMe = createFromSends (exportNodeIDs ());
if (debug_) {
// NOTE (mfh 20 Mar 2014) If remoteImageIDs could contain
// duplicates, then its length might not be the right check here,
// even if we account for selfMessage_. selfMessage_ is set in
// createFromSends.
std::ostringstream os;
os << "Proc " << myRank << ": {numProcsSendingToMe: "
<< numProcsSendingToMe << ", remoteImageIDs.size(): "
<< remoteImageIDs.size () << ", selfMessage_: "
<< (selfMessage_ ? "true" : "false") << "}" << std::endl;
std::cerr << os.str ();
}
if (debug_) {
*out_ << myRank << ": createFromRecvs done" << endl;
}
howInitialized_ = Details::DISTRIBUTOR_INITIALIZED_BY_CREATE_FROM_RECVS;
}
} // namespace Tpetra
#endif // TPETRA_DISTRIBUTOR_HPP
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