This file is indexed.

/usr/include/trilinos/Tpetra_SerialPlatform.hpp is in libtrilinos-tpetra-dev 12.4.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
// @HEADER
// ***********************************************************************
//
//          Tpetra: Templated Linear Algebra Services Package
//                 Copyright (2008) Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ************************************************************************
// @HEADER

#ifndef TPETRA_SERIALPLATFORM_HPP
#define TPETRA_SERIALPLATFORM_HPP

#include <Tpetra_ConfigDefs.hpp>
#include <Tpetra_Core.hpp>
#include <Kokkos_DefaultNode.hpp>
#include <Teuchos_DefaultSerialComm.hpp>
#include <Teuchos_Describable.hpp>

namespace Tpetra {

  /// \brief Implementation of the Platform concept for non-MPI platforms.
  ///
  /// \warning This class will be DEPRECATED, in favor of the
  ///   initialize() functions in Tpetra_Core.hpp.  Please use those
  ///   functions for safe, consistent initialization Kokkos, on which
  ///   Tpetra depends.  If you must use this class, please prefer the
  ///   constructors that take \c argc and \c argv.  Those
  ///   constructors will call initialize() for you.
  ///
  /// SerialPlatform is an implementation of Tpetra's Platform
  /// concept.  Classes implementing the Platform concept are
  /// templated on the Kokkos Node type.  They have at least the
  /// following public interface:
  /// \code
  /// // This is not a real class; it just illustrates the concept.
  /// template<class Node>
  /// class Platform {
  /// public:
  ///   typedef Node NodeType;
  ///   explicit Platform (const RCP<Node>& node);
  ///   RCP<const Comm<int> > getComm() const;
  ///   RCP<Node> getNode() const;
  /// };
  /// \endcode
  /// SerialPlatform uses a "communicator" containing one process.  It
  /// is available whether or not Trilinos was built with MPI (the
  /// Message-Passing Interface which provides a distributed-memory
  /// parallel programming model).
  template <class Node>
  class SerialPlatform : public Teuchos::Describable {
  public:
    //! @name Typedefs
    //@{

    //! Kokkos Node type; the template parameter of this class.
    typedef Node NodeType;

    //@}
    //! @name Constructors and destructor
    //@{

    /// \brief Constructor that accepts the same arguments as
    ///   Tpetra::initialize().
    ///
    /// \param argc [in/out] First argument of Tpetra::initialize().
    /// \param argv [in/out] Second argument of Tpetra::initialize().
    explicit SerialPlatform (int* argc, char*** argv) :
      comm_ (Teuchos::null),
      node_ (Teuchos::null)
    {
      initialize (argc, argv);
      comm_ = getDefaultComm ();

      // mfh 29 Jun 2014: Don't initialize the Node yet.  This ensures
      // that (new) Kokkos won't get initialized with the wrong
      // command-line arguments, at least not until getNode() is
      // called.  Initializing Kokkos with the wrong command-line
      // arguments may result in poor performance due to the wrong
      // assignment of software threads to hardware execution units.
      //
      // if (node_.is_null ()) {
      //   node_ = KokkosClassic::Details::getNode<NodeType> ();
      // }
    }

    /// Constructor that accepts a Kokkos Node.
    ///
    /// \param node [in/out] The Kokkos Node instance.  If null, this
    ///   class will create a Node with default parameters, at some
    ///   time no later than during the first call to getNode().
    explicit SerialPlatform (const Teuchos::RCP<NodeType>& node) :
      comm_ (Teuchos::rcp (new Teuchos::SerialComm<int> ())),
      node_ (node)
    {
      // mfh 29 Jun 2014: Don't initialize the Node yet.  See above note.
    }

    /// \brief Constructor that accepts the same arguments as
    ///   Tpetra::initialize(), plus a Kokkos Node.
    ///
    /// \param argc [in/out] First argument of Tpetra::initialize().
    /// \param argv [in/out] Second argument of Tpetra::initialize().
    /// \param node [in/out] The Kokkos Node instance.  If null, this
    ///   class will create a Node with default parameters, at some
    ///   time no later than during the first call to getNode().
    explicit SerialPlatform (int* argc, char*** argv,
                             const Teuchos::RCP<NodeType>& node) :
      comm_ (Teuchos::null),
      node_ (node)
    {
      initialize (argc, argv);
      comm_ = getDefaultComm ();
      // mfh 29 Jun 2014: Don't initialize the Node yet.  See above note.
    }

    //! Destructor (virtual for memory safety of derived classes).
    virtual ~SerialPlatform () {}

    //@}
    //! @name Methods to access the communicator and Kokkos Node.
    //@{

    //! The Teuchos::Comm instance with which this object was created.
    Teuchos::RCP<const Teuchos::Comm<int> > getComm () const {
      return comm_;
    }

    //! The Kokkos Node instance with which this object was created.
    Teuchos::RCP<Node> getNode () const {
      typedef SerialPlatform<NodeType> this_type;
      if (node_.is_null ()) {
        // NOTE (mfh 29 Jun 2014): Creating an instance of one of the
        // new Kokkos wrapper Nodes _must_ call Kokkos::initialize.
        // If Kokkos has not been initialized yet, this may result in
        // Kokkos being initialized correctly, since we have no way to
        // pass it the command-line arguments at this point.  This is
        // why we should prefer the *Platform constructors that take
        // argc and argv, since they can (and do) call
        // Kokkos::initialize (by calling Tpetra::initialize).
        //
        // mfh 29 Jun 2014: We're only keeping the *Platform classes
        // for backwards compatibility anyway, so I don't feel bad
        // about the const_cast here.
        const_cast<this_type*> (this)->node_ =
          KokkosClassic::Details::getNode<NodeType> ();
        TEUCHOS_TEST_FOR_EXCEPTION(
          node_.is_null (), std::logic_error, "Tpetra::MpiPlatform::getNode: "
          "KokkosClassic::Details::getNode<NodeType>() returned null.  "
          "This should never happen.  "
          "Please report this bug to the Tpetra developers.");
      }
      return node_;
    }

    //@}
  protected:
    //! Teuchos::Comm object instantiated for the platform.
    Teuchos::RCP<const Teuchos::Comm<int> > comm_;
    //! Kokkos Node object instantiated for the platform.
    Teuchos::RCP<NodeType> node_;

  private:
    //! Unimplemented copy constructor (syntactically forbidden).
    SerialPlatform (const SerialPlatform<NodeType>& platform);
    //! Unimplemented assignment operator (syntactically forbidden).
    SerialPlatform& operator= (const SerialPlatform<NodeType>& platform);
  };

  /// \class SerialPlatform<Tpetra::Details::DefaultTypes::node_type>
  /// \brief SerialPlatform specialization for the default Node type.
  ///
  /// \note Tpetra::Details::DefaultTypes::node_type is a typedef, and
  ///   may have a different type, depending on Trilinos' build
  ///   options.
  ///
  /// \note In the past (up to and including the 10.8 Trilinos
  ///   release), the specialization of SerialPlatform for the default
  ///   Node type delayed instantiation of the default Node instance
  ///   until getNode() was called.  We have changed this behavior to
  ///   simplify the code and make the specialization of
  ///   SerialPlatform conform more closely to the generic version of
  ///   SerialPlatform.
  template <>
  class SerialPlatform<Tpetra::Details::DefaultTypes::node_type> :
    public Teuchos::Describable {
  public:
    //! @name Typedefs
    //@{

    //! Kokkos Node type; the template parameter of this class.
    typedef Tpetra::Details::DefaultTypes::node_type NodeType;

    //@}
    //! @name Constructors and destructor
    //@{

    /// \brief Default constructor: uses Kokkos default node.
    ///
    /// The specialization of SerialPlatform for the default Node type
    /// includes a default constructor.  At some point before the
    /// first call to getNode() returns, this class will create a Node
    /// with default parameters.
    SerialPlatform () :
      comm_ (Teuchos::rcp (new Teuchos::SerialComm<int> ())),
      node_ (Teuchos::null)
    {
      // mfh 29 Jun 2014: Don't initialize the Node yet.  This ensures
      // that (new) Kokkos won't get initialized with the wrong
      // command-line arguments, at least not until getNode() is
      // called.  Initializing Kokkos with the wrong command-line
      // arguments may result in poor performance due to the wrong
      // assignment of software threads to hardware execution units.
    }

    /// \brief Constructor that accepts the same arguments as
    ///   Tpetra::initialize().
    ///
    /// \param argc [in/out] First argument of Tpetra::initialize().
    /// \param argv [in/out] Second argument of Tpetra::initialize().
    explicit SerialPlatform (int* argc, char*** argv) :
      comm_ (Teuchos::null),
      node_ (Teuchos::null)
    {
      initialize (argc, argv);
      comm_ = getDefaultComm ();
      // mfh 29 Jun 2014: Don't initialize the Node yet.  See above note.
    }

    /// \brief Constructor that accepts a Kokkos Node.
    ///
    /// This version of the constructor is declared "explicit" to
    /// forbid silent type conversions from the Node instance to a
    /// SerialPlatform.  (A single-argument constructor that is not
    /// declared "explicit" defines a type conversion method from the
    /// input type to the constructor's class's type.)  The "explicit"
    /// declaration does not affect typical use of this constructor.
    ///
    /// \param node [in/out] The Kokkos Node instance.  If null, this
    ///   class will create a Node with default parameters, at some
    ///   time no later than during the first call to getNode().
    explicit SerialPlatform (const Teuchos::RCP<NodeType>& node) :
      comm_ (Teuchos::rcp (new Teuchos::SerialComm<int> ())),
      node_ (node)
    {
      // mfh 29 Jun 2014: Don't initialize the Node yet.  See above note.
    }

    /// \brief Constructor that accepts the same arguments as
    ///   Tpetra::initialize(), plus a Kokkos Node.
    ///
    /// \param argc [in/out] First argument of Tpetra::initialize().
    /// \param argv [in/out] Second argument of Tpetra::initialize().
    /// \param node [in/out] The Kokkos Node instance.  If null, this
    ///   class will create a Node with default parameters, at some
    ///   time no later than during the first call to getNode().
    explicit SerialPlatform (int* argc, char*** argv,
                             const Teuchos::RCP<NodeType>& node) :
      comm_ (Teuchos::null),
      node_ (node)
    {
      initialize (argc, argv);
      comm_ = getDefaultComm ();
      // mfh 29 Jun 2014: Don't initialize the Node yet.  See above note.
    }

    //! Destructor (virtual for memory safety of derived classes).
    virtual ~SerialPlatform () {}

    //@}
    //! @name Methods to access the communicator and Kokkos Node.
    //@{

    //! The Teuchos::Comm instance with which this object was created.
    Teuchos::RCP<const Teuchos::Comm<int> > getComm() const {
      return comm_;
    }

    //! The Kokkos Node instance with which this object was created.
    Teuchos::RCP<Tpetra::Details::DefaultTypes::node_type> getNode () const {
      typedef SerialPlatform<NodeType> this_type;
      if (node_.is_null ()) {
        // NOTE (mfh 29 Jun 2014): Creating an instance of one of the
        // new Kokkos wrapper Nodes _must_ call Kokkos::initialize.
        // If Kokkos has not been initialized yet, this may result in
        // Kokkos being initialized correctly, since we have no way to
        // pass it the command-line arguments at this point.  This is
        // why we should prefer the *Platform constructors that take
        // argc and argv, since they can (and do) call
        // Kokkos::initialize (by calling Tpetra::initialize).
        //
        // mfh 29 Jun 2014: We're only keeping the *Platform classes
        // for backwards compatibility anyway, so I don't feel bad
        // about the const_cast here.
        const_cast<this_type*> (this)->node_ =
          KokkosClassic::Details::getNode<NodeType> ();
        TEUCHOS_TEST_FOR_EXCEPTION(
          node_.is_null (), std::logic_error, "Tpetra::MpiPlatform::getNode: "
          "KokkosClassic::Details::getNode<NodeType>() returned null.  "
          "This should never happen.  "
          "Please report this bug to the Tpetra developers.");
      }
      return node_;
    }

    //@}
  private:
    //! Unimplemented copy constructor (syntactically forbidden).
    SerialPlatform (const SerialPlatform<NodeType>& platform);

    //! Unimplemented assignment operator (syntactically forbidden).
    SerialPlatform& operator= (const SerialPlatform<NodeType>& platform);

  protected:
    //! Teuchos::Comm object instantiated for the platform.
    Teuchos::RCP<const Teuchos::Comm<int> > comm_;

    //! Node object instantiated for the platform.
    Teuchos::RCP<NodeType> node_;
  };

} // namespace Tpetra

#endif // TPETRA_SERIALPLATFORM_HPP