/usr/lib/python2.7/dist-packages/openturns/viewer.py is in python-openturns 1.5-7build2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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Graph viewer.
Graph or Drawable viewer using matplotlib
Examples
--------
>>> import openturns as ot
>>> from openturns.viewer import View
>>> graph = ot.Normal().drawPDF()
>>> view = View(graph, plot_kwargs={'color':'blue'})
>>> view.save('curve.png', dpi=100)
>>> view.show(block=False)
"""
import openturns as ot
import numpy as np
import matplotlib
import matplotlib.pyplot as plt
from distutils.version import LooseVersion
import os
import re
import warnings
import io
import sys
class View(object):
"""
Create the figure.
Parameters
----------
graph : :class:`~openturns.Graph, :class:`~openturns.Drawable`
A Graph or Drawable object.
figure : :class:`matplotlib.figure.Figure`
The figure to draw on.
axes : :class:`matplotlib.axes.Axes`
The axes to draw on.
plot_kwargs : dict, optional
Used when drawing Cloud, Curve drawables
Passed on as matplotlib.axes.Axes.plot kwargs
axes_kwargs : dict, optional
Passed on to matplotlib.figure.Figure.add_subplot kwargs
bar_kwargs : dict, optional
Used when drawing BarPlot drawables
Passed on to matplotlib.pyplot.bar kwargs
pie_kwargs : dict, optional
Used when drawing Pie drawables
Passed on to matplotlib.pyplot.pie kwargs
polygon_kwargs : dict, optional
Used when drawing Polygon drawables
Passed on to matplotlib.patches.Polygon kwargs
polygoncollection_kwargs : dict, optional
Used when drawing PolygonArray drawables
Passed on to matplotlib.collection.PolygonCollection kwargs
contour_kwargs : dict, optional
Used when drawing Contour drawables
Passed on to matplotlib.pyplot.contour kwargs
clabel_kwargs : dict, optional
Used when drawing Contour drawables
Passed on to matplotlib.pyplot.clabel kwargs
step_kwargs : dict, optional
Used when drawing Staircase drawables
Passed on to matplotlib.pyplot.step kwargs
text_kwargs : dict, optional
Used when drawing Pairs drawables
Passed on to matplotlib.axes.Axes.text kwargs
legend_kwargs : dict, optional
Passed on to matplotlib.axes.Axes.legend kwargs
add_legend : bool, optional
Adds a legend if True. Default is True.
"""
@staticmethod
def CheckDict(arg):
"""Check that the argument is a python dictionary."""
result = arg
if arg is None:
result = dict()
elif not isinstance(arg, dict):
raise TypeError('Argument is not a dict')
return result
@staticmethod
def ToUnicode(s):
"""Convert to unicode if necessary."""
if isinstance(s, bytes):
s = s.decode('utf8')
return s
def __init__(self,
graph,
figure=None,
axes=[],
plot_kwargs=None,
axes_kwargs=None,
bar_kwargs=None,
pie_kwargs=None,
polygon_kwargs=None,
polygoncollection_kwargs=None,
contour_kwargs=None,
step_kwargs=None,
clabel_kwargs=None,
text_kwargs=None,
legend_kwargs=None,
add_legend=True,
**kwargs):
# prevent Qt from stopping the interpreter, see matplotlib PR #1905
if LooseVersion(matplotlib.__version__) < LooseVersion('1.3'):
# check for DISPLAY env variable on X11 build of Qt
if plt.get_backend().startswith('Qt4'):
from matplotlib.backends.qt4_compat import QtGui
if hasattr(QtGui, 'QX11Info'):
display = os.environ.get('DISPLAY')
if display is None or not re.search(':\d', display):
raise RuntimeError('Invalid DISPLAY variable')
if not isinstance(graph, ot.Graph) and not isinstance(graph, ot.GraphImplementation):
if not isinstance(graph, ot.Drawable) and not isinstance(graph, ot.DrawableImplementation):
raise RuntimeError(
'-- The given object cannot be converted into a Graph nor Drawable.')
else:
# convert Drawable => Graph
drawable = graph
graph = ot.Graph()
graph.add(drawable)
drawables = graph.getDrawables()
size = len(drawables)
if size == 0:
warnings.warn('-- Nothing to draw.')
return
# check that arguments are dictionnaries
axes_kwargs = self.CheckDict(axes_kwargs)
plot_kwargs_default = self.CheckDict(plot_kwargs)
bar_kwargs_default = self.CheckDict(bar_kwargs)
pie_kwargs_default = self.CheckDict(pie_kwargs)
polygon_kwargs_default = self.CheckDict(polygon_kwargs)
polygoncollection_kwargs_default = self.CheckDict(
polygoncollection_kwargs)
contour_kwargs_default = self.CheckDict(contour_kwargs)
step_kwargs_default = self.CheckDict(step_kwargs)
clabel_kwargs_default = self.CheckDict(clabel_kwargs)
text_kwargs_default = self.CheckDict(text_kwargs)
legend_kwargs = self.CheckDict(legend_kwargs)
# set step drawstyle
step_kwargs_default.setdefault('where', 'post')
# set title
axes_kwargs.setdefault('title', self.ToUnicode(graph.getTitle()))
# set scale
if (graph.getLogScale() == ot.GraphImplementation.LOGX) or (graph.getLogScale() == ot.GraphImplementation.LOGXY):
axes_kwargs.setdefault('xscale', 'log')
if (graph.getLogScale() == ot.GraphImplementation.LOGY) or (graph.getLogScale() == ot.GraphImplementation.LOGXY):
axes_kwargs.setdefault('yscale', 'log')
# set bounding box
axes_kwargs.setdefault(
'xlim', [graph.getBoundingBox()[0], graph.getBoundingBox()[1]])
axes_kwargs.setdefault(
'ylim', [graph.getBoundingBox()[2], graph.getBoundingBox()[3]])
# set figure
if figure is None:
if len(axes) == 0:
self._fig = plt.figure()
else:
self._fig = axes[0].get_figure()
else:
self._fig = figure
if len(axes) == 0:
axes = self._fig.axes
# set axes
if len(axes) == 0:
self._ax = [self._fig.add_subplot(111, **axes_kwargs)]
else:
self._ax = axes
has_labels = False
if graph.getGrid():
self._ax[0].grid()
for drawable in drawables:
# reset working dictionaries by excplicitely creating copies
plot_kwargs = dict(plot_kwargs_default)
bar_kwargs = dict(bar_kwargs_default)
pie_kwargs = dict(pie_kwargs_default)
polygon_kwargs = dict(polygon_kwargs_default)
polygoncollection_kwargs = dict(polygoncollection_kwargs_default)
contour_kwargs = dict(contour_kwargs_default)
step_kwargs = dict(step_kwargs_default)
clabel_kwargs = dict(clabel_kwargs_default)
text_kwargs = dict(text_kwargs_default)
# set color
if (not 'color' in plot_kwargs_default) and (not 'c' in plot_kwargs_default):
plot_kwargs['color'] = drawable.getColorCode()
if (not 'color' in bar_kwargs_default) and (not 'c' in bar_kwargs_default):
bar_kwargs['color'] = drawable.getColorCode()
if (not 'color' in step_kwargs_default) and (not 'c' in step_kwargs_default):
step_kwargs['color'] = drawable.getColorCode()
# set marker
pointStyleDict = {'square': 's', 'circle': 'o', 'triangleup': '2', 'plus': '+', 'times': '+', 'diamond': '+', 'triangledown':
'v', 'star': '*', 'fsquare': 's', 'fcircle': 'o', 'ftriangleup': '2', 'fdiamond': 'D', 'bullet': '.', 'dot': ',', 'none': 'None'}
if not 'marker' in plot_kwargs_default:
try:
plot_kwargs['marker'] = pointStyleDict[
drawable.getPointStyle()]
except:
warnings.warn(
'-- Unknown marker: ' + drawable.getPointStyle())
# set line style
lineStyleDict = {'solid': '-', 'dashed': '--', 'dotted':
':', 'dotdash': '-.', 'longdash': '--', 'twodash': '--'}
if (not 'linestyle' in plot_kwargs_default) and (not 'ls' in plot_kwargs_default):
try:
plot_kwargs['linestyle'] = lineStyleDict[
drawable.getLineStyle()]
except:
warnings.warn('-- Unknown line style')
if (not 'linestyle' in step_kwargs_default) and (not 'ls' in step_kwargs_default):
try:
step_kwargs['linestyle'] = lineStyleDict[
drawable.getLineStyle()]
except:
warnings.warn('-- Unknown line style')
# set line width
if (not 'linewidth' in plot_kwargs_default) and (not 'lw' in plot_kwargs_default):
plot_kwargs['linewidth'] = drawable.getLineWidth()
if (not 'linewidth' in step_kwargs_default) and (not 'lw' in step_kwargs_default):
step_kwargs['linewidth'] = drawable.getLineWidth()
# retrieve data
data = drawable.getData()
x = data.getMarginal(0)
if data.getDimension() > 1:
y = data.getMarginal(1)
# add label, title
drawableKind = drawable.getImplementation().getClassName()
if drawableKind != 'Pie':
self._ax[0].set_xlabel(self.ToUnicode(graph.getXTitle()))
self._ax[0].set_ylabel(self.ToUnicode(graph.getYTitle()))
if (len(drawable.getLegend()) > 0) and ((drawableKind != 'Cloud') or (drawable.getPointStyle() != 'none')):
label = self.ToUnicode(drawable.getLegend())
has_labels = True
plot_kwargs.setdefault('label', label)
bar_kwargs.setdefault('label', label)
step_kwargs.setdefault('label', label)
if drawableKind == 'BarPlot':
# linestyle for bar() is different than the one for plot()
if 'linestyle' in bar_kwargs_default:
bar_kwargs.pop('linestyle')
if (not 'linestyle' in plot_kwargs_default) and (not 'ls' in plot_kwargs_default):
lineStyleDict = {'solid': 'solid', 'dashed': 'dashed', 'dotted':
'dotted', 'dotdash': 'dashdot', 'longdash': 'dashed', 'twodash': 'dashed'}
if drawable.getLineStyle() in lineStyleDict:
bar_kwargs['linestyle'] = lineStyleDict[
drawable.getLineStyle()]
else:
warnings.warn(
'-- Unknown line style: ' + drawable.getLineStyle())
xi = drawable.getOrigin()
for i in range(x.getSize()):
# label only the first bar to avoid getting several legend
# items
if (i == 1) and ('label' in bar_kwargs):
bar_kwargs.pop('label')
self._ax[0].bar(
xi, height=y[i][0], width=x[i][0], **bar_kwargs)
xi += x[i][0]
elif drawableKind == 'Cloud':
plot_kwargs['linestyle'] = 'None'
self._ax[0].plot(x, y, **plot_kwargs)
elif drawableKind == 'Curve':
self._ax[0].plot(x, y, **plot_kwargs)
elif drawableKind == 'Polygon':
if (not 'facecolor' in polygon_kwargs_default) and (not 'fc' in polygon_kwargs_default):
polygon_kwargs['facecolor'] = drawable.getColorCode()
if (not 'edgecolor' in polygon_kwargs_default) and (not 'ec' in polygon_kwargs_default):
polygon_kwargs['edgecolor'] = drawable.ConvertFromName(
drawable.getEdgeColor())
self._ax[0].add_patch(
matplotlib.patches.Polygon(data, **polygon_kwargs))
elif drawableKind == 'PolygonArray':
polygonsNumber = drawable.getPalette().getSize()
verticesNumber = drawable.getData().getSize() // polygonsNumber
colors = drawable.getPalette()
colorsRGBA = []
for i in range(polygonsNumber):
rgba = drawable.ConvertToRGBA(colors[i])
colorsRGBA.append(
(rgba[0] / 255.0, rgba[1] / 255.0, rgba[2] / 255.0, rgba[3] / 255.0))
if (not 'facecolors' in polygoncollection_kwargs_default):
polygoncollection_kwargs['facecolors'] = colorsRGBA
if (not 'edgecolors' in polygon_kwargs_default):
polygoncollection_kwargs['edgecolors'] = colorsRGBA
self._ax[0].add_collection(
matplotlib.collections.PolyCollection(np.array(data).reshape((polygonsNumber, verticesNumber, 2)), **polygoncollection_kwargs))
elif drawableKind == 'Pie':
pie_kwargs.setdefault(
'labels', list(map(self.ToUnicode, drawable.getLabels())))
pie_kwargs.setdefault('colors', drawable.getPalette())
self._ax[0].set_aspect('equal')
self._ax[0].pie(x, **pie_kwargs)
elif drawableKind == 'Contour':
X, Y = np.meshgrid(drawable.getX(), drawable.getY())
Z = np.reshape(drawable.getData(), (
drawable.getX().getSize(), drawable.getY().getSize()))
contour_kwargs.setdefault('levels', drawable.getLevels())
if (not 'linestyles' in contour_kwargs_default) and (not 'ls' in contour_kwargs_default):
try:
contour_kwargs['linestyles'] = lineStyleDict[
drawable.getLineStyle()]
except:
warnings.warn('-- Unknown line style')
contourset = self._ax[0].contour(X, Y, Z, **contour_kwargs)
clabel_kwargs.setdefault('fontsize', 8)
clabel_kwargs.setdefault('fmt', '%g')
plt.clabel(contourset, **clabel_kwargs)
elif drawableKind == 'Staircase':
self._ax[0].step(x, y, **step_kwargs)
elif drawableKind == 'Pairs':
# disable axis : grid, ticks, axis
self._ax[0].axison = False
if 'title' in axes_kwargs:
axes_kwargs.pop('title')
axes_kwargs['xticks'] = []
axes_kwargs['yticks'] = []
dim = drawable.getData().getDimension()
labels = drawable.getLabels()
# adjust font
if (not 'fontsize' in text_kwargs_default) and (not 'size' in text_kwargs_default):
text_kwargs['fontsize'] = max(16 - dim, 4)
text_kwargs.setdefault('horizontalalignment', 'center')
text_kwargs.setdefault('verticalalignment', 'center')
for i in range(dim):
for j in range(dim):
if len(self._ax) <= dim * dim:
self._ax.append(self._fig.add_subplot(
dim, dim, 1 + i * dim + j, **axes_kwargs))
if i != j:
x = drawable.getData().getMarginal(i)
y = drawable.getData().getMarginal(j)
x_min = x.getMin()[0]
x_max = x.getMax()[0]
x_margin = 0.1 * (x_max - x_min)
y_min = y.getMin()[0]
y_max = y.getMax()[0]
y_margin = 0.1 * (y_max - y_min)
plot_kwargs['linestyle'] = 'None'
self._ax[1 + i * dim + j].plot(x, y, **plot_kwargs)
self._ax[1 + i * dim + j].set_xlim(
x_min - x_margin, x_max + x_margin)
self._ax[1 + i * dim + j].set_ylim(
y_min - y_margin, y_max + y_margin)
else:
text_kwargs['transform'] = self._ax[
1 + i * dim + j].transAxes
self._ax[1 + i * dim + j].text(
0.5, 0.5, labels[i], **text_kwargs)
else:
raise ValueError(
'Drawable type not implemented: ' + drawableKind)
# Add legend
if add_legend and has_labels and (graph.getLegendPosition() != ''):
# set legend position
if not 'loc' in legend_kwargs:
try:
legendPositionDict = {'bottomright': 'lower right',
'bottom': 'lower center',
'bottomleft': 'lower left',
'left': 'center left',
'topleft': 'upper left',
'topright': 'upper right',
'right': 'center right',
'center': 'center'}
legend_kwargs['loc'] = legendPositionDict[
graph.getLegendPosition()]
except:
warnings.warn(
'-- Unknown legend position: ' + graph.getLegendPosition())
# set a single legend point
legend_kwargs.setdefault('numpoints', 1)
# enable round box by default
legend_kwargs.setdefault('fancybox', True)
# enable shadow by default
legend_kwargs.setdefault('shadow', True)
self._ax[0].legend(**legend_kwargs)
def show(self, **kwargs):
"""
Display the graph on screen.
Parameters
----------
kwargs:
block: bool, optional
If true (default), block until the graph is closed.
These parameters are passed to matplotlib.pyplot.show()
"""
plt.show(**kwargs)
def save(self, fname, **kwargs):
"""
Save the graph as file.
Parameters
----------
fname: bool, optional
A string containing a path to a filename from which file format is deduced.
kwargs:
Refer to matplotlib.figure.Figure.savefig documentation for valid keyword arguments.
"""
self._fig.savefig(fname, **kwargs)
def getFigure(self):
"""
Accessor to the underlying figure object.
Refer to matplotlib.figure.Figure for further information.
"""
return self._fig
def getAxes(self):
"""
Get the list of Axes objects.
Refer to matplotlib.axes.Axes for further information.
"""
return self._ax
def close(self):
"""Close the figure."""
plt.close(self._fig)
def ToSVGString(graph):
"""
Convert as SVG file.
Parameters
----------
graph : object
A Graph or Drawable object.
Returns a SVG representation as string
"""
if sys.version_info[0] >= 3:
output = io.StringIO()
else:
output = io.BytesIO()
# save interactive mode state
ision = plt.isinteractive()
plt.ioff()
view = View(graph)
view.save(output, format='svg')
view.close()
# restore interactive mode state
if ision:
plt.ion()
return output.getvalue()
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