qiime 1.8.0+dfsg-4ubuntu1 / usr / share / pyshared

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/usr/share/pyshared/ is in qiime 1.8.0+dfsg-4ubuntu1.

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File Mime Type Owner Mode Size
..
/usr/share/pyshared/qiime/ root:root 0o755
/usr/share/pyshared/qiime/__init__.py text/x-python root:root 0o644 1.0 KB
/usr/share/pyshared/qiime/add_alpha_to_mapping_file.py text/x-python root:root 0o755 8.2 KB
/usr/share/pyshared/qiime/add_qiime_labels.py text/x-python root:root 0o755 5.1 KB
/usr/share/pyshared/qiime/adjust_seq_orientation.py text/x-python root:root 0o755 1.5 KB
/usr/share/pyshared/qiime/align_seqs.py text/x-python root:root 0o644 10.9 KB
/usr/share/pyshared/qiime/alpha_diversity.py text/x-python root:root 0o644 15.2 KB
/usr/share/pyshared/qiime/assign_taxonomy.py text/x-python root:root 0o644 43.5 KB
/usr/share/pyshared/qiime/barcode.py text/x-python root:root 0o644 3.6 KB
/usr/share/pyshared/qiime/beta_diversity.py text/x-python root:root 0o644 16.9 KB
/usr/share/pyshared/qiime/beta_metrics.py text/x-python root:root 0o644 7.5 KB
/usr/share/pyshared/qiime/biplots.py text/x-python root:root 0o644 5.3 KB
/usr/share/pyshared/qiime/categorized_dist_scatterplot.py text/x-python root:root 0o755 2.4 KB
/usr/share/pyshared/qiime/check_id_map.py text/x-python root:root 0o644 37.7 KB
/usr/share/pyshared/qiime/clean_raxml_parsimony_tree.py text/x-python root:root 0o644 2.7 KB
/usr/share/pyshared/qiime/cluster_quality.py text/x-python root:root 0o644 1.2 KB
/usr/share/pyshared/qiime/collate_alpha.py text/x-python root:root 0o644 2.3 KB
/usr/share/pyshared/qiime/colors.py text/x-python root:root 0o644 23.1 KB
/usr/share/pyshared/qiime/compare_alpha_diversity.py text/x-python root:root 0o644 11.6 KB
/usr/share/pyshared/qiime/compare_categories.py text/x-python root:root 0o755 7.2 KB
/usr/share/pyshared/qiime/compare_distance_matrices.py text/x-python root:root 0o755 11.4 KB
/usr/share/pyshared/qiime/compare_taxa_summaries.py text/x-python root:root 0o755 24.8 KB
/usr/share/pyshared/qiime/convert_fastaqual_fastq.py text/x-python root:root 0o644 11.4 KB
/usr/share/pyshared/qiime/core_microbiome.py text/x-python root:root 0o644 3.3 KB
/usr/share/pyshared/qiime/demultiplex_fasta.py text/x-python root:root 0o755 33.5 KB
/usr/share/pyshared/qiime/denoise_wrapper.py text/x-python root:root 0o644 2.3 KB
/usr/share/pyshared/qiime/denoiser/ root:root 0o755
/usr/share/pyshared/qiime/denoiser/__init__.py text/x-python root:root 0o644 461 bytes
/usr/share/pyshared/qiime/denoiser/cluster_utils.py text/x-python root:root 0o644 9.8 KB
/usr/share/pyshared/qiime/denoiser/denoise_postprocess.py text/x-python root:root 0o644 3.4 KB
/usr/share/pyshared/qiime/denoiser/denoise_worker.py text/x-python root:root 0o644 5.5 KB
/usr/share/pyshared/qiime/denoiser/flowgram_clustering.py text/x-python root:root 0o644 28.5 KB
/usr/share/pyshared/qiime/denoiser/flowgram_filter.py text/x-python root:root 0o644 7.8 KB
/usr/share/pyshared/qiime/denoiser/make_cluster_jobs.py text/x-python root:root 0o755 3.2 KB
/usr/share/pyshared/qiime/denoiser/preprocess.py text/x-python root:root 0o644 11.3 KB
/usr/share/pyshared/qiime/denoiser/utils.py text/x-python root:root 0o644 13.9 KB
/usr/share/pyshared/qiime/detrend.py text/x-c++ root:root 0o644 5.9 KB
/usr/share/pyshared/qiime/distance_matrix_from_mapping.py text/x-python root:root 0o644 5.5 KB
/usr/share/pyshared/qiime/estimate_observation_richness.py text/x-python root:root 0o755 20.1 KB
/usr/share/pyshared/qiime/exclude_seqs_by_blast.py text/x-python root:root 0o644 11.7 KB
/usr/share/pyshared/qiime/extract_barcodes.py text/x-python root:root 0o644 23.3 KB
/usr/share/pyshared/qiime/filter.py text/x-python root:root 0o644 24.8 KB
/usr/share/pyshared/qiime/filter_alignment.py text/x-python root:root 0o755 7.0 KB
/usr/share/pyshared/qiime/filter_otus_by_sample.py text/x-python root:root 0o644 4.1 KB
/usr/share/pyshared/qiime/format.py text/x-python root:root 0o755 40.7 KB
/usr/share/pyshared/qiime/golay.py text/x-python root:root 0o644 7.6 KB
/usr/share/pyshared/qiime/group.py text/x-python root:root 0o755 26.6 KB
/usr/share/pyshared/qiime/hamming.py text/x-python root:root 0o644 4.9 KB
/usr/share/pyshared/qiime/hierarchical_cluster.py text/x-python root:root 0o644 2.6 KB
/usr/share/pyshared/qiime/identify_chimeric_seqs.py text/x-python root:root 0o755 45.3 KB
/usr/share/pyshared/qiime/insert_seqs_into_tree.py text/x-python root:root 0o644 1.6 KB
/usr/share/pyshared/qiime/join_paired_ends.py text/x-python root:root 0o644 3.1 KB
/usr/share/pyshared/qiime/longitudinal_otu_category_significance.py text/x-python root:root 0o644 4.3 KB
/usr/share/pyshared/qiime/make_2d_plots.py text/x-python root:root 0o644 22.1 KB
/usr/share/pyshared/qiime/make_3d_plots.py text/x-python root:root 0o644 57.9 KB
/usr/share/pyshared/qiime/make_bipartite_network.py text/x-python root:root 0o644 10.6 KB
/usr/share/pyshared/qiime/make_bootstrapped_tree.py text/x-python root:root 0o644 1.3 KB
/usr/share/pyshared/qiime/make_distance_boxplots.py text/x-python root:root 0o755 12.1 KB
/usr/share/pyshared/qiime/make_distance_histograms.py text/x-python root:root 0o644 31.1 KB
/usr/share/pyshared/qiime/make_fastq.py text/x-python root:root 0o644 3.2 KB
/usr/share/pyshared/qiime/make_library_id_lists.py text/x-python root:root 0o644 1.3 KB
/usr/share/pyshared/qiime/make_otu_heatmap.py text/x-python root:root 0o644 7.8 KB
/usr/share/pyshared/qiime/make_otu_heatmap_html.py text/x-python root:root 0o644 9.8 KB
/usr/share/pyshared/qiime/make_otu_network.py text/x-python root:root 0o644 56.7 KB
/usr/share/pyshared/qiime/make_otu_table.py text/x-python root:root 0o644 2.5 KB
/usr/share/pyshared/qiime/make_per_library_sff.py text/x-python root:root 0o644 3.5 KB
/usr/share/pyshared/qiime/make_phylogeny.py text/x-python root:root 0o644 8.6 KB
/usr/share/pyshared/qiime/make_rarefaction_plots.py text/x-python root:root 0o644 50.9 KB
/usr/share/pyshared/qiime/map_reads_to_reference.py text/x-python root:root 0o644 14.6 KB
/usr/share/pyshared/qiime/merge_mapping_files.py text/x-python root:root 0o755 3.0 KB
/usr/share/pyshared/qiime/nmds.py text/x-python root:root 0o644 1.4 KB
/usr/share/pyshared/qiime/otu_significance.py text/x-python root:root 0o644 15.8 KB
/usr/share/pyshared/qiime/parallel/ root:root 0o755
/usr/share/pyshared/qiime/parallel/__init__.py text/x-python root:root 0o644 619 bytes
/usr/share/pyshared/qiime/parallel/align_seqs.py text/x-python root:root 0o644 4.9 KB
/usr/share/pyshared/qiime/parallel/alpha_diversity.py text/x-python root:root 0o644 2.4 KB
/usr/share/pyshared/qiime/parallel/assign_taxonomy.py text/x-python root:root 0o644 6.2 KB
/usr/share/pyshared/qiime/parallel/beta_diversity.py text/x-python root:root 0o644 9.6 KB
/usr/share/pyshared/qiime/parallel/blast.py text/x-python root:root 0o755 4.0 KB
/usr/share/pyshared/qiime/parallel/identify_chimeric_seqs.py text/x-python root:root 0o755 9.0 KB
/usr/share/pyshared/qiime/parallel/map_reads_to_reference.py text/x-python root:root 0o644 10.4 KB
/usr/share/pyshared/qiime/parallel/merge_otus.py text/x-python root:root 0o644 4.7 KB
/usr/share/pyshared/qiime/parallel/multiple_rarefactions.py text/x-python root:root 0o644 3.0 KB
/usr/share/pyshared/qiime/parallel/pick_otus.py text/x-python root:root 0o644 22.1 KB
/usr/share/pyshared/qiime/parallel/poller.py text/x-python root:root 0o755 6.8 KB
/usr/share/pyshared/qiime/parallel/util.py text/x-python root:root 0o644 21.5 KB
/usr/share/pyshared/qiime/parse.py text/x-python root:root 0o644 34.9 KB
/usr/share/pyshared/qiime/pick_otus.py text/x-python root:root 0o644 65.0 KB
/usr/share/pyshared/qiime/pick_rep_set.py text/x-python root:root 0o644 13.3 KB
/usr/share/pyshared/qiime/plot_rank_abundance_graph.py text/x-python root:root 0o644 3.9 KB
/usr/share/pyshared/qiime/plot_semivariogram.py text/x-python root:root 0o644 5.4 KB
/usr/share/pyshared/qiime/plot_taxa_summary.py text/x-python root:root 0o644 44.6 KB
/usr/share/pyshared/qiime/principal_coordinates.py text/x-python root:root 0o644 1.7 KB
/usr/share/pyshared/qiime/process_sff.py text/x-python root:root 0o644 9.4 KB
/usr/share/pyshared/qiime/pycogent_backports/ root:root 0o755
/usr/share/pyshared/qiime/pycogent_backports/__init__.py text/x-python root:root 0o644 509 bytes
/usr/share/pyshared/qiime/pycogent_backports/alpha_diversity.py text/x-python root:root 0o644 38.9 KB
/usr/share/pyshared/qiime/pycogent_backports/blat.py text/x-python root:root 0o644 16.2 KB
/usr/share/pyshared/qiime/pycogent_backports/bwa.py text/x-python root:root 0o644 25.5 KB
/usr/share/pyshared/qiime/pycogent_backports/distribution_plots.py text/x-python root:root 0o755 28.2 KB
/usr/share/pyshared/qiime/pycogent_backports/fastq.py text/x-c++ root:root 0o644 324 bytes
/usr/share/pyshared/qiime/pycogent_backports/fastq_join.py text/x-python root:root 0o644 8.4 KB
/usr/share/pyshared/qiime/pycogent_backports/mothur.py text/x-python root:root 0o644 19.4 KB
/usr/share/pyshared/qiime/pycogent_backports/rdp_classifier.py text/x-python root:root 0o644 22.3 KB
/usr/share/pyshared/qiime/pycogent_backports/seqprep.py text/x-python root:root 0o644 14.6 KB
/usr/share/pyshared/qiime/pycogent_backports/tax2tree.py text/x-python root:root 0o644 2.8 KB
/usr/share/pyshared/qiime/pycogent_backports/test.py text/x-python root:root 0o644 71.4 KB
/usr/share/pyshared/qiime/pycogent_backports/uclust.py text/x-python root:root 0o755 21.8 KB
/usr/share/pyshared/qiime/pycogent_backports/usearch.py text/x-python root:root 0o755 94.8 KB
/usr/share/pyshared/qiime/quality.py text/x-python root:root 0o644 1.5 KB
/usr/share/pyshared/qiime/quality_scores_plot.py text/x-python root:root 0o755 7.0 KB
/usr/share/pyshared/qiime/rarefaction.py text/x-python root:root 0o644 7.7 KB
/usr/share/pyshared/qiime/relatedness_library.py text/x-python root:root 0o644 6.6 KB
/usr/share/pyshared/qiime/remote.py text/x-python root:root 0o755 12.3 KB
/usr/share/pyshared/qiime/shared_phylotypes.py text/x-python root:root 0o644 2.9 KB
/usr/share/pyshared/qiime/simsam.py text/x-python root:root 0o755 10.9 KB
/usr/share/pyshared/qiime/sort.py text/x-python root:root 0o644 7.1 KB
/usr/share/pyshared/qiime/split.py text/x-python root:root 0o644 5.1 KB
/usr/share/pyshared/qiime/split_libraries.py text/x-python root:root 0o644 59.3 KB
/usr/share/pyshared/qiime/split_libraries_fastq.py text/x-python root:root 0o644 16.2 KB
/usr/share/pyshared/qiime/stats.py text/x-python root:root 0o644 82.9 KB
/usr/share/pyshared/qiime/submit_to_mgrast.py text/x-python root:root 0o644 6.7 KB
/usr/share/pyshared/qiime/summarize_taxa.py text/x-python root:root 0o644 5.3 KB
/usr/share/pyshared/qiime/supervised_learning.py text/x-python root:root 0o644 9.2 KB
/usr/share/pyshared/qiime/test.py text/x-python root:root 0o644 112.0 KB
/usr/share/pyshared/qiime/transform_coordinate_matrices.py text/x-python root:root 0o644 9.7 KB
/usr/share/pyshared/qiime/tree_compare.py text/x-python root:root 0o644 8.8 KB
/usr/share/pyshared/qiime/trim_sff_primers.py text/x-python root:root 0o644 5.9 KB
/usr/share/pyshared/qiime/truncate_fasta_qual_files.py text/x-python root:root 0o755 6.2 KB
/usr/share/pyshared/qiime/truncate_reverse_primer.py text/x-python root:root 0o755 6.8 KB
/usr/share/pyshared/qiime/util.py text/x-python root:root 0o644 76.6 KB
/usr/share/pyshared/qiime/validate_demultiplexed_fasta.py text/x-python root:root 0o755 19.9 KB
/usr/share/pyshared/qiime/workflow/ root:root 0o755
/usr/share/pyshared/qiime/workflow/__init__.py text/x-python root:root 0o644 639 bytes
/usr/share/pyshared/qiime/workflow/ampliconnoise.py text/x-python root:root 0o755 9.5 KB
/usr/share/pyshared/qiime/workflow/core_diversity_analyses.py text/x-python root:root 0o644 21.1 KB
/usr/share/pyshared/qiime/workflow/downstream.py text/x-python root:root 0o644 29.2 KB
/usr/share/pyshared/qiime/workflow/pick_open_reference_otus.py text/x-python root:root 0o644 40.9 KB
/usr/share/pyshared/qiime/workflow/upstream.py text/x-python root:root 0o644 17.2 KB
/usr/share/pyshared/qiime/workflow/util.py text/x-python root:root 0o755 5.5 KB

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