/usr/include/blasr/datastructures/alignment/AlignmentStats.hpp is in libblasr-dev 0~20151014+gitbe5d1bf-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 | #ifndef _BLASR_ALIGNMENT_STATS_HPP_
#define _BLASR_ALIGNMENT_STATS_HPP_
namespace blasr {
class AlignmentStats {
public:
int nMatch;
int nMismatch;
int nIns;
int nDel;
float pctSimilarity;
int score;
int mapQV;
AlignmentStats();
AlignmentStats &Assign(const AlignmentStats &rhs);
AlignmentStats& operator=(const AlignmentStats &rhs);
void CopyStats(AlignmentStats rhs);
};
}
#endif // _BLASR_ALIGNMENT_STATS_HPP_
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