libblasr-dev 0~20161219-1 / usr / include / pbseq / alignment / algorithms

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/usr/include/pbseq/alignment/algorithms/ is in libblasr-dev 0~20161219-1.

This file is owned by root:root, with mode 0o755.

File Mime Type Owner Mode Size
..
/usr/include/pbseq/alignment/algorithms/alignment/ root:root 0o755
/usr/include/pbseq/alignment/algorithms/alignment/AffineGuidedAlign.hpp text/x-c root:root 0o644 20.6 KB
/usr/include/pbseq/alignment/algorithms/alignment/AffineKBandAlign.hpp text/x-c root:root 0o644 14.0 KB
/usr/include/pbseq/alignment/algorithms/alignment/AlignmentFormats.hpp text/plain root:root 0o644 216 bytes
/usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp text/x-c root:root 0o644 5.3 KB
/usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp text/x-c root:root 0o644 17.7 KB
/usr/include/pbseq/alignment/algorithms/alignment/BaseScoreFunction.hpp text/x-c++ root:root 0o644 469 bytes
/usr/include/pbseq/alignment/algorithms/alignment/DistanceMatrixScoreFunction.hpp text/x-c++ root:root 0o644 1.5 KB
/usr/include/pbseq/alignment/algorithms/alignment/DistanceMatrixScoreFunctionImpl.hpp text/x-c root:root 0o644 3.9 KB
/usr/include/pbseq/alignment/algorithms/alignment/ExtendAlign.hpp text/x-c++ root:root 0o644 14.6 KB
/usr/include/pbseq/alignment/algorithms/alignment/FullQVAlign.hpp text/x-c root:root 0o644 5.3 KB
/usr/include/pbseq/alignment/algorithms/alignment/GraphPaper.hpp text/x-c root:root 0o644 871 bytes
/usr/include/pbseq/alignment/algorithms/alignment/GraphPaperImpl.hpp text/plain root:root 0o644 4.2 KB
/usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp text/x-c++ root:root 0o644 20.9 KB
/usr/include/pbseq/alignment/algorithms/alignment/IDSScoreFunction.hpp text/x-c root:root 0o644 4.7 KB
/usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp text/x-c root:root 0o644 10.3 KB
/usr/include/pbseq/alignment/algorithms/alignment/OneGapAlignment.hpp text/x-c root:root 0o644 12.5 KB
/usr/include/pbseq/alignment/algorithms/alignment/QualityValueScoreFunction.hpp text/x-c++ root:root 0o644 1.8 KB
/usr/include/pbseq/alignment/algorithms/alignment/SDPAlign.hpp text/x-c root:root 0o644 2.5 KB
/usr/include/pbseq/alignment/algorithms/alignment/SDPAlignImpl.hpp text/x-c root:root 0o644 25.8 KB
/usr/include/pbseq/alignment/algorithms/alignment/SWAlign.hpp text/x-c root:root 0o644 540 bytes
/usr/include/pbseq/alignment/algorithms/alignment/SWAlignImpl.hpp text/x-c root:root 0o644 15.3 KB
/usr/include/pbseq/alignment/algorithms/alignment/ScoreMatrices.hpp text/x-c root:root 0o644 383 bytes
/usr/include/pbseq/alignment/algorithms/alignment/StringToScoreMatrix.hpp text/x-c root:root 0o644 212 bytes
/usr/include/pbseq/alignment/algorithms/alignment/sdp/ root:root 0o755
/usr/include/pbseq/alignment/algorithms/alignment/sdp/FragmentSort.hpp text/x-c++ root:root 0o644 425 bytes
/usr/include/pbseq/alignment/algorithms/alignment/sdp/FragmentSortImpl.hpp text/x-c root:root 0o644 374 bytes
/usr/include/pbseq/alignment/algorithms/alignment/sdp/NonoverlappingSparseDynamicProgramming.h text/x-c root:root 0o644 5.6 KB
/usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPColumn.hpp text/x-c++ root:root 0o644 545 bytes
/usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPFragment.hpp text/x-c++ root:root 0o644 2.8 KB
/usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPSet.hpp text/x-c++ root:root 0o644 1.1 KB
/usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPSetImpl.hpp text/x-c root:root 0o644 2.2 KB
/usr/include/pbseq/alignment/algorithms/alignment/sdp/SparseDynamicProgramming.hpp text/x-c root:root 0o644 1.3 KB
/usr/include/pbseq/alignment/algorithms/alignment/sdp/SparseDynamicProgrammingImpl.hpp text/x-c root:root 0o644 10.4 KB
/usr/include/pbseq/alignment/algorithms/alignment/sdp/VariableLengthSDPFragment.h text/x-c root:root 0o644 862 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/ root:root 0o755
/usr/include/pbseq/alignment/algorithms/anchoring/BWTSearch.hpp text/x-c root:root 0o644 1013 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/BWTSearchImpl.hpp text/plain root:root 0o644 446 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/BasicEndpoint.hpp text/x-c++ root:root 0o644 1.5 KB
/usr/include/pbseq/alignment/algorithms/anchoring/BasicEndpointImpl.hpp text/x-c root:root 0o644 2.3 KB
/usr/include/pbseq/alignment/algorithms/anchoring/ClusterProbability.hpp text/x-c root:root 0o644 366 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/Coordinate.hpp text/x-c++ root:root 0o644 1.2 KB
/usr/include/pbseq/alignment/algorithms/anchoring/FindMaxInterval.hpp text/x-c++ root:root 0o644 5.9 KB
/usr/include/pbseq/alignment/algorithms/anchoring/FindMaxIntervalImpl.hpp text/x-c root:root 0o644 33.0 KB
/usr/include/pbseq/alignment/algorithms/anchoring/GlobalChain.hpp text/x-c root:root 0o644 1.3 KB
/usr/include/pbseq/alignment/algorithms/anchoring/GlobalChainImpl.hpp text/x-c root:root 0o644 6.2 KB
/usr/include/pbseq/alignment/algorithms/anchoring/LISPValue.hpp text/x-c root:root 0o644 701 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/LISPValueImpl.hpp text/x-c root:root 0o644 4.5 KB
/usr/include/pbseq/alignment/algorithms/anchoring/LISPValueWeightor.hpp text/x-c++ root:root 0o644 1.5 KB
/usr/include/pbseq/alignment/algorithms/anchoring/LISPValueWeightorImpl.hpp text/x-c root:root 0o644 3.7 KB
/usr/include/pbseq/alignment/algorithms/anchoring/LISQValueWeightor.hpp text/x-c++ root:root 0o644 936 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/LISSizeWeightor.hpp text/x-c++ root:root 0o644 272 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/LISSizeWeightorImpl.hpp text/plain root:root 0o644 364 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/LongestIncreasingSubsequence.hpp text/x-c root:root 0o644 792 bytes
/usr/include/pbseq/alignment/algorithms/anchoring/LongestIncreasingSubsequenceImpl.hpp text/x-c root:root 0o644 3.4 KB
/usr/include/pbseq/alignment/algorithms/anchoring/MapBySuffixArray.hpp text/x-c root:root 0o644 1.7 KB
/usr/include/pbseq/alignment/algorithms/anchoring/MapBySuffixArrayImpl.hpp text/x-c root:root 0o644 10.8 KB
/usr/include/pbseq/alignment/algorithms/anchoring/PrioritySearchTree.hpp text/x-c++ root:root 0o644 1.8 KB
/usr/include/pbseq/alignment/algorithms/anchoring/PrioritySearchTreeImpl.hpp text/plain root:root 0o644 9.8 KB
/usr/include/pbseq/alignment/algorithms/anchoring/ScoreAnchors.hpp text/x-c root:root 0o644 1.5 KB
/usr/include/pbseq/alignment/algorithms/anchoring/ScoreAnchorsImpl.hpp text/plain root:root 0o644 4.9 KB
/usr/include/pbseq/alignment/algorithms/compare/ root:root 0o755
/usr/include/pbseq/alignment/algorithms/compare/CompareStrings.hpp text/x-c++ root:root 0o644 1.8 KB
/usr/include/pbseq/alignment/algorithms/sorting/ root:root 0o755
/usr/include/pbseq/alignment/algorithms/sorting/DifferenceCovers.hpp text/x-c root:root 0o644 1.3 KB
/usr/include/pbseq/alignment/algorithms/sorting/Karkkainen.hpp text/x-c root:root 0o644 4.4 KB
/usr/include/pbseq/alignment/algorithms/sorting/LightweightSuffixArray.hpp text/x-c++ root:root 0o644 2.9 KB
/usr/include/pbseq/alignment/algorithms/sorting/MultikeyQuicksort.hpp text/x-c root:root 0o644 1.6 KB
/usr/include/pbseq/alignment/algorithms/sorting/qsufsort.hpp text/x-c++ root:root 0o644 14.4 KB

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